EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03787

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:94425090-94426380

Target genes

Number: 17
Name	Ensembl ID

Gm11518	ENSMUSG00000081604
Tob1	ENSMUSG00000037573
Wfikkn2	ENSMUSG00000044177
Luc7l3	ENSMUSG00000020863
Ankrd40	ENSMUSG00000020864
Abcc3	ENSMUSG00000020865
Cacna1g	ENSMUSG00000020866
Epn3	ENSMUSG00000010080
Mycbpap	ENSMUSG00000039110
Rsad1	ENSMUSG00000039096
Acsf2	ENSMUSG00000076435
Lrrc59	ENSMUSG00000020869
Mrpl27	ENSMUSG00000024414
Eme1	ENSMUSG00000039055
Xylt2	ENSMUSG00000020868
Gm11542	ENSMUSG00000085051
Myst2	ENSMUSG00000038909

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr11:94426252-94426263	GGGCGGGAAGG	+	6.62
NFIC	MA0161.2	chr11:94425374-94425385	TCTGCCAAGTA	-	6.62
TBP	MA0108.2	chr11:94426331-94426346	CTATAAATGGGCCGG	+	6.2

Enhancer Sequence

GGTTCTGGCG TAGTTGTGGT CTCCTCCACC ACCTCCCAAA AACAGAAGCC ATCTCTGGCC 60
AAGCAACCCA GAGCTCACCC TGGGCCAAAG CTGTAACCTG CCTGCTCACC CTCCCTTCTC 120
CACAGGACTC CAGACACTGT GGCTGGCAAG TGAACAGAAG CCTGGTCCAC CAGGGCGGGG 180
CTGCCCACAA CCTAGCATCT GGCTAGCCAG GGTTGGTTGC CTGTAGCCAA CACCCCACTT 240
CCCACCAGCT CACACAGTCC TGGGGTCATT GCCCAGCTAT GGCCTCTGCC AAGTACACAT 300
TGGCGCCACT AGGCTGCCAC TCTGAGACCC CCCTTAGGGG TGGGTCCTAA CCACCGGTGA 360
GGGGAGGATC CGGAGATGAG GATATTTGGG GGAGATTAAG AAGGAGACTG TGCAACCATG 420
CTTGTTCAGC GGCCTGTGGT CTCCAGGTGT GTTGCCAGTC AGTCCTGTGG TTCACTCCCC 480
ACACACACCA GTTCCCACAT TTCTGTGTGG CCTTCAGCCC TAGAAAGGGG AATGAGGGTA 540
CAAAGGACAG GGAACAGGAA GCCCAGAGCT AAGAGAGGGG TCGTGAATAA GCCCACAATC 600
CGGAGCTCTT ACGGGCCTGG TGCCACTGGG CTCCGAGAAG GGGCAGAGCC AAACGCACGG 660
CTGTCAGCTA GCCTCTGCAA CCAGCTCCCC CACCTCCTTG GGATAAACTG AGGAACCCAG 720
AAGCGGGAGC CCAACCCACA GCAGCTCTCA CGCTCCGCCT GCGCCGCACA ACAGTCCCAT 780
TAAAGCGCCG CCGGCTGGCC GACCGCGGTG AGACGCATCC GGCTGTCGGG CCCCACTTCC 840
TCCCTCCCGG AGTCCAGGGT GACCTGTCTG CCAAGGGTGT ATGGGGGAGG GAGACGTAGA 900
GAACTCAAAC TTGAGCAAAT AAATAAGTTC TGGGAACACT TCCCTCTGCC CAGTGGAAAT 960
TCAGAGGCCC CTCGACACAC CTATCACCGT CCACCCCACC TCGGGGTGTT GGTCCAGATA 1020
GAGGAGGGTA GGGGAAGGTG CAGCATAATG TTTGCAAACA GGAACCAAGG GGTTGGGGTT 1080
CAGGGGAAGG GCCCTCAGCC CTACACACGG TCTCCTGCTG TGAAAAGAGG CCCCCAGCCA 1140
TCGAGGATGG GGACGCATCT CTGGGCGGGA AGGGGTTAAA TCAGTGGCTT CGGTGCTCCA 1200
CGTAGTAGCT GGCTCCGCTG CCAACTGCGG TCAAGGCTGC CCTATAAATG GGCCGGGAGA 1260
CCCGAGAGTC GAGGACTTGT CGCTGCCTTA 1290