EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03780

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:94268120-94269700

Target genes

Number: 23
Name	Ensembl ID

Utp18	ENSMUSG00000054079
Mbtd1	ENSMUSG00000059474
Nme2	ENSMUSG00000020857
Gm20390	ENSMUSG00000091228
Nme1	ENSMUSG00000037601
Spag9	ENSMUSG00000020859
Gm11518	ENSMUSG00000081604
B230206L02Rik	ENSMUSG00000086003
Tob1	ENSMUSG00000037573
Wfikkn2	ENSMUSG00000044177
Luc7l3	ENSMUSG00000020863
Ankrd40	ENSMUSG00000020864
Abcc3	ENSMUSG00000020865
Cacna1g	ENSMUSG00000020866
Epn3	ENSMUSG00000010080
Mycbpap	ENSMUSG00000039110
Rsad1	ENSMUSG00000039096
Chad	ENSMUSG00000039084
Acsf2	ENSMUSG00000076435
Lrrc59	ENSMUSG00000020869
Mrpl27	ENSMUSG00000024414
Eme1	ENSMUSG00000039055
Xylt2	ENSMUSG00000020868

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid5a	MA0602.1	chr11:94269085-94269099	AATCTCAATATTAG	-	6.81
PKNOX1	MA0782.1	chr11:94269341-94269353	TGATAGCTGTCA	-	6.27
ZNF263	MA0528.1	chr11:94268165-94268186	GAAGGAGAGAGAGAGAGAGAG	+	6.56
ZNF263	MA0528.1	chr11:94268843-94268864	CCCCCCTCTTCCCTCTCCTCT	-	7.47

Enhancer Sequence

TAGGAATTTT GTACAGCTTC CCTTAAGGAG AGAGAGAGAG AGAGAGAAGG AGAGAGAGAG 60
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAAAGCAAA GCCAGCTTGT 120
ACAAACACCC CCTTTCTCCA GCTGAGAGGG CTAGAGGGAT CAGAGCTGGG CGCCATCAAA 180
CACCCCAGGG AGATCAAACC AGGTGTTTGC TTTCACGAGT GGTATCATTT CTGCCCCAAA 240
GAGCAATCAA AAAAGCTCTC TGAGCTTAGG AAGTAGGCCA GAGGACAGAC GCCTGCAAGT 300
CCAGCTTCCC AGCAACCAGC AACCTGGCAC TGCGGGCTCT CAGCTGCCTG TGCAGATGGG 360
CGCTGTGAGT GAGGGGTGCC ACTTAGGTTT CAAGAATCCA ACCCAGGGCT TGGAATGCAG 420
CTTAGGGGTA GAGTCCTGCC TCAAATACAT ATAAGCCCTG GGTCTGATTT CTATGCCAAA 480
GCATGAGTAT ACACACACAC ACACACACAT GCACACGCAC ACGCACACCT GGCTTGAAAG 540
GGTGGGGCTG TTCAAGGGAA TGGAAATGGT AAGGACAGAT GTTTGCAATG GCTGATGGGT 600
GAAAAGGCTG GCTGAGTCTT TGGCTACTGC TTTTTGGCAT GGGGACTTCA ACCATAGCAT 660
CAGAAAGTGG CTCTAGGTCA GGTGGCTTCC CGGACTCCTG GCCCCCCTAC ACTGGTGGCC 720
TTTCCCCCCT CTTCCCTCTC CTCTGGCTCC CTCCCACTGG GCAAGCAGCA GCAGACCATG 780
TAAGCACCTT AATTGTATCA TTTATCACCC CTCAGGGAGC CAGCTCCCTA GCTCAGTGTT 840
CTGGCTACCA CCAACCCTTC AGCTTCATCA GGAGGTCTCC TCTGGACTCC AGTCCTGGTC 900
CCTGCATTCT CATCATTTTG GGGGGGGGAG GGAGGGGGGG TCAACCTGCT CTGTTTACAC 960
AGATTAATCT CAATATTAGC AGGCAGATAG ATGAAGTTCA AGGCAAGGGG CTTTAGTCCA 1020
GACACCTCAG GTCACCACCC AGTCAGAGTG TGGCAGATGC TGGGGTGGAA GAACAGGGCA 1080
GGGAAAACCC AGAAGCGTCT GCCCCTCCCC CGCCAGCCCC TTGATTTAGT TCTGTAGCAG 1140
CTGAGGCTGC CTCCCAGCCT CCACTGGCCC CATTAACCAA AACAGCTTCA TTATGCCAAT 1200
TTCTAGCTTT CAGTGCGCGG CTGATAGCTG TCAGCAGAAA TAAGAATTAA TCTGGAATTA 1260
CTCACATTCT CTGAGCTGCT TGGCTCAGAG GATGCGATAA AGCTCTGATA GAAAAAAAGA 1320
AGGCCGTGTT TCCAGCCCTC CCAGGCACAG GGGTCTCTCC TGTAAGCTTG CAGGGGAGGT 1380
GCAAGGATGG AGCCCTCCAG GGCTGGGCAT TTGAGCTCAT CCTCTCTCAG ACACAAAGCT 1440
CATATGCACC AATGCTCAGG GACGCGCACA GGCACGCGCA CACACAGGCA ACCCCGAACC 1500
TTCCCTCCCA CCACCCACTT CCTTTCTCCA GGCCTCTAAA CACGCCTATC TCTGCATCCC 1560
CTTTGCTTTT ACTCTGGACT 1580