EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03481

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:77738900-77740910

Target genes

Number: 29
Name	Ensembl ID

Nufip2	ENSMUSG00000037857
Myo18a	ENSMUSG00000000631
Gm10277	ENSMUSG00000069804
Pipox	ENSMUSG00000017453
Gm11190	ENSMUSG00000055045
Sez6	ENSMUSG00000000632
Phf12	ENSMUSG00000037791
Dhrs13	ENSMUSG00000020834
A030003K02Rik	ENSMUSG00000087050
Flot2	ENSMUSG00000061981
Eral1	ENSMUSG00000020832
BC017647	ENSMUSG00000037750
Gm12571	ENSMUSG00000060727
Traf4	ENSMUSG00000017386
Nek8	ENSMUSG00000017405
Tlcd1	ENSMUSG00000019437
Rpl23a	ENSMUSG00000058546
Rab34	ENSMUSG00000002059
Proca1	ENSMUSG00000044122
Sdf2	ENSMUSG00000002064
Supt6h	ENSMUSG00000002052
2610507B11Rik	ENSMUSG00000010277
Spag5	ENSMUSG00000002055
Pigs	ENSMUSG00000041958
Unc119	ENSMUSG00000002058
Tmem199	ENSMUSG00000051232
Poldip2	ENSMUSG00000001100
Tnfaip1	ENSMUSG00000017615
Ift20	ENSMUSG00000001105

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU2F1	MA0785.1	chr11:77739608-77739620	ATTATGCAAATA	+	6.32
POU3F3	MA0788.1	chr11:77739608-77739621	ATTATGCAAATAT	+	6.29
ZNF263	MA0528.1	chr11:77740846-77740867	TTTCCCTCCTCTTCTTGCTCA	-	6

Enhancer Sequence

CTCTCCTGTC ACCATTTCTA GGTCACCATG GAATCCCTGG TTGCCTATTG ACGAAGGGTA 60
TCTAAATGGT GACCCTGAGG CCTCTGCATC TTTCCACGGA GCTTAGCCTA CCAGGTGACC 120
CATTTCCTTA GGACATGATC ATCAACCTGG TCCTGAGTCC CCAGCCCCTG AGCAGCACCG 180
TAAACCCAAT GCCTCTGGCA GACACGTTTT ATGTCAGTTC AAGCACTAGG ACTACTGAGT 240
TCAGAGGATT TTATTTCTAG AGCCTTCCAT ATTTCTCCAG GATTATCACC TGTCTTTGCT 300
CCCCCCCCCC TCTCTCTCTC CTGGTTTATT ATTTTTGGAC CCTTTCCAAG CCAAGCTGCC 360
TTGATCGCTT GGGGAGACAA AGGCCCCCAG CATCCTCCCA CGGTGTCTTT GGGTCTGGCA 420
AGGGTGCCCT TGGGGACCAT TTCTTTTCCT TTGGCATAAA CTCTTCGACT GGCCACAATA 480
TCCAGGTGGC CTTGGCTTTT AGGAGCTAGT TTGCCTAAAA GACTTTCTGT GTGTGTCAGG 540
GACTATGGAG GCGGGGAGTG AAGGCCTCTG TCTCCAAGGT TGGGGAGGGC TATGAGAAGA 600
GTAAGCCCTG GGGTACAGAG GGGAGGGAGA AGGCCAGCTG TTCTCTTTCT TACACCGTGC 660
CAACCTAGCC TGACACCAAA TTAATAGCAT TCAAATGAGA TGCAAAGCAT TATGCAAATA 720
TTGAAGAGAA GGCCACTCTT ACCAGAGCCT CTGGGCTGTT GGAAGGCCAG TGCCTGGAGC 780
CCTTTCATGG AGGACCCCAT GGGCTCGCTT CCACTTCAAT CCTCATACTT CAGTACCAGC 840
TTGTGCGTAG GACCAAAGAC ACTGGCCAGG CACTCAAATT GGCTTTGCCT CCCAAGCACT 900
CAGGCAGGGC CCCTTCCCAT CTAAAACAAG CCACAGGCAG CTGTGAAGGT AGCATAACCT 960
CCCTGGGTCT CCTTTCCCCA CTCATCAGCA CGTATGCAAA CTAGATGCAA GGTTTTTGCA 1020
TCTATTTAAC TGTCCATTAA AATAGCCCCA TGCCCATCAC CTCTGCACAG GCCCCTGCTT 1080
CCAAATTGCC AACCCCTGCT GCCTGCAAAA GCCATGTGTT TCCTGAGCCT GGTAATTGCT 1140
GTGGTGTTTG TTGAGCTGTA TTTGCATTTG ATTGTCATTT AACTTTCTAT CTTTCTCCTT 1200
CAATCAAACC GGGTAGGGGG ATAGGGGTGG GGTGGAAAGG TGGGGAGCTG GCGGCGAGGG 1260
TGTGGGGAGA GAGTTGGGCT TCTACAACTG ATTCTTCATT TTTGTCTCAG CCCTATCATG 1320
GTTTTCAAAG AGCTTCATTA ATTAGTACCA CAAACTTGAA CCCGGAGACT TCTGCCTCCA 1380
CGTGGCGGGG GAGGGGCTCC TCCCACCCGT CCCAGGGCTC CTAAGTGCAA ATGATTTTGC 1440
CAACGGGATG GATCTCAAGT CCTATCTCCA GTCTGCGTGT TTCAGCACCT GCCTCATTTC 1500
TGCCCAGCCA GTGGCATTAA ACATTTATGG AGCTGTAGAG GATCAAAGGC CTCCGCTGGA 1560
GGTGGTGGGC AGGCTGGAGG CCCGGGTTTG GAGGATGGAA AGTAGTTCAC ATCAAACCGC 1620
TTTCTGCTGC TGTCTCAGTG CACCCTAGGC TCTTGCCACA GATCTGGTCC CATTCCTGGA 1680
GTGGGAGCTA ATGCTCAGAG CCAGAACCCT CAGGTGACTG ACTTTGGGTA GCCAAGGATA 1740
TCAGGCCTGA TATTCATGGC CATACCAGAA GCCACTGAGT CTGGAGACTT GCTCAAAGAT 1800
GATGGTGGCT GTGCCCCTAC CATCTCTGGG ATGAAGTGAC AGCCCTTTCC TCTGCTCCCC 1860
TAAAACCCAA AACCCCTTTG GATGCTCTGA TTTGAAAACT GTCTTGCAGA AGAGTAGATC 1920
TGGGCTTTCT TGGTTTGGGG TTTTCTTTTC CCTCCTCTTC TTGCTCAGAA AGCAAGTGTC 1980
ATCCCAGCTG ACTTCAAAAT AAGTCACCGA 2010