EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03430

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:76137410-76138210

Target genes

Number: 18
Name	Ensembl ID

Pitpna	ENSMUSG00000017781
Rph3al	ENSMUSG00000020847
Fam101b	ENSMUSG00000020846
Gm12340	ENSMUSG00000080701
Vps53	ENSMUSG00000017288
Fam57a	ENSMUSG00000069808
Dbil5	ENSMUSG00000038057
Gemin4	ENSMUSG00000049396
Rnmtl1	ENSMUSG00000038046
Glod4	ENSMUSG00000017286
Nxn	ENSMUSG00000020844
Timm22	ENSMUSG00000020843
Rpl36	ENSMUSG00000024205
Abr	ENSMUSG00000017631
Bhlha9	ENSMUSG00000044243
Gosr1	ENSMUSG00000010392
Blmh	ENSMUSG00000020840
Ccdc55	ENSMUSG00000037958

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_02591	chr11:76067427-76140401	HFSCs
mSE_03069	chr11:76125820-76151799	TACs
mSE_05870	chr11:76137227-76138428	E14.5_Limb
mSE_09376	chr11:76134871-76142521	MEF

Enhancer Sequence

TTTTTATCTT AGAGCACACA CACACACACA CACACACACA CACACACGAA GGCAGTACAG 60
CCTCAACTGA TGGATGGATT CTGGCTGGGA ATCAGGTTCA AGTCTCCTCT CTACCATGCC 120
CCAGCAAGGT GACCCTAGGC ATCTCTGGAG GACTAAGTGA GAATAGAGAG CAGTGAGCAG 180
CCGGTCCTCA CGCGTGGCGG ACGCTGAATT AGTGATGAAG CCGCTGTTGC TGCAGAAACT 240
CTCTGAGCCA CAACACCTGG ACTGATGATA CAACTCAAGG CACAAAGACA GACTTCGGAA 300
GGACGGAGAT AAGAGACACA GGCAGCTCCA TCTGTGGGGG CTGCAGAACG CAGGAGGGTG 360
GTGCCTGCAA TTCCAAGATG AAGGCCATGG AGGGGCCAAG CACCAGAATG TTCTGTCTCT 420
GCTCCAGCAC ACAGCACATA AAACACACAA TGCTCCCCCG AGCACAAAGG GCATGCAGGA 480
ACACGGCCTG CCTGCTATCC TTCTCACTAA ATGCCCTGCA CTCCCGGAAG ACTGGAACTT 540
CAAACCAACA GAAGTCAACA CCTTGTGTGC AGAGTGACTT CATTAAACAG TGTCAAGCAT 600
GCCAACGTGA ACTCAGCGTC TAGACCCGAT TAGGTTATTA TGAAATAAAC TTGATTAAGA 660
ACAAATCCCT CTTTAGAAGA GCAAAGAGCC CAGCGAGTCT CCTGCACATC GGAAGCTGGC 720
CTCAATTATC CCTTTTTCCT GTGAACTTCA CAAGGCGCCA GCAGGTGGGA GATAATTAAA 780
GTTTTCATAA AACTTGTTTT 800