EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03344

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:70658510-70659050

Target genes

Number: 25
Name	Ensembl ID

Pelp1	ENSMUSG00000018921
Med11	ENSMUSG00000018923
Psmb6	ENSMUSG00000018286
Pld2	ENSMUSG00000020828
Mink1	ENSMUSG00000020827
Gp1ba	ENSMUSG00000050675
Rnf167	ENSMUSG00000040746
Slc25a11	ENSMUSG00000014606
Pfn1	ENSMUSG00000018293
Gm12319	ENSMUSG00000087523
Eno3	ENSMUSG00000060600
Spag7	ENSMUSG00000018287
Kif1c	ENSMUSG00000020821
Gm12320	ENSMUSG00000085502
A430084P05Rik	ENSMUSG00000057135
Rabep1	ENSMUSG00000020817
Rpl23a	ENSMUSG00000081968
Gm12322	ENSMUSG00000084139
Nup88	ENSMUSG00000040667
Rpain	ENSMUSG00000018449
C1qbp	ENSMUSG00000018446
Dhx33	ENSMUSG00000040620
Mis12	ENSMUSG00000040599
Derl2	ENSMUSG00000018442
6330403K07Rik	ENSMUSG00000018451

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chr11:70658558-70658572	GGGGCCCTTGGGGG	+	6.3
Zfx	MA0146.2	chr11:70658527-70658541	GCGGGCGCGGCCTG	+	6.42

Enhancer Sequence

GTGAGGCGCC CACCATGGCG GGCGCGGCCT GCCCGGCGCA GCGTCGTGGG GGCCCTTGGG 60
GGCAGGAAGG GCACGCGCGC GGGCCCGGGG GTGACCCACG GACTGGAGGC GGGGGCGCGC 120
GGGCGACGCG TGCTGGGGCA GCCGGGCTGG GGAGGGAGAG GGAGGCGCGC GCGGGCGGCC 180
GCGGGGAAGG GCGTGGGGAG GCTGCAGGGA GGGAGCCGGC GGAGAGGAAG GTGCGGTGGG 240
ATCAGCACGT GGGTTCCTCG GGTGGGGAGG ATGGAAATGG AGAGCATGTG CTATATTCCT 300
TAAAGAAAAC GCGAGCCCTC GCCTTGGTAG TGGCCGTGTG CCCTCTCGCC CCACCTCCGC 360
TCCCGCCTCC TCAGGCCACG CTCCAGCGCT CTTTGCACCG GACTTGTAAA AGTAACTGTG 420
ATCCTAAGCA TTGGGTAGCA TTCTTTTGAG TGGTTGTGTT GCTTCATGGT AAGGCCGGGC 480
TCATATCTTA GTCTCTTAGG GCCTCAGTTT CTGACGAACG AAGAGCGCTT GATTCATGTC 540