EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
MM090-03278 
Organism
Mus musculus 
Tissue/cell
Limb_E11.5 
Coordinate
chr11:69370990-69373190 
Target genes
Number: 56             
NameEnsembl ID
Ndel1ENSMUSG00000018736
RangrfENSMUSG00000032892
CntrobENSMUSG00000032782
Trappc1ENSMUSG00000049299
Kcnab3ENSMUSG00000018470
Gm16040ENSMUSG00000086900
A030009H04RikENSMUSG00000043419
Gm17305ENSMUSG00000091095
Chd3ENSMUSG00000018474
Lsmd1ENSMUSG00000059278
Cyb5d1ENSMUSG00000044795
Tmem88ENSMUSG00000045377
1700064E03RikENSMUSG00000085178
Kdm6bENSMUSG00000018476
6030455H03RikENSMUSG00000086591
Dnahc2ENSMUSG00000005237
Efnb3ENSMUSG00000003934
Wrap53ENSMUSG00000041346
Trp53ENSMUSG00000059552
Atp1b2ENSMUSG00000041329
ShbgENSMUSG00000005202
Sat2ENSMUSG00000069835
Gm12308ENSMUSG00000083485
Gm12309ENSMUSG00000083300
Fxr2ENSMUSG00000018765
Mir467fENSMUSG00000080573
Mpdu1ENSMUSG00000018761
Cd68ENSMUSG00000018774
SNORA67ENSMUSG00000065862
snoU6ENSMUSG00000089542
Eif4a1ENSMUSG00000059796
Senp3ENSMUSG00000005204
2010012P19RikENSMUSG00000085890
BC096441ENSMUSG00000018752
Polr2aENSMUSG00000005198
Amac1ENSMUSG00000018776
Zbtb4ENSMUSG00000018750
Chrnb1ENSMUSG00000041189
Fgf11ENSMUSG00000042826
Tmem102ENSMUSG00000089876
Spem1ENSMUSG00000041165
Nlgn2ENSMUSG00000051790
1810027O10RikENSMUSG00000070394
Plscr3ENSMUSG00000019461
Tnk1ENSMUSG00000001583
Kctd11ENSMUSG00000046731
2810408A11RikENSMUSG00000018570
Neurl4ENSMUSG00000047284
Gps2ENSMUSG00000023170
Eif5aENSMUSG00000078812
Rai12ENSMUSG00000018565
GabarapENSMUSG00000018567
Phf23ENSMUSG00000018572
Dvl2ENSMUSG00000020888
AcadvlENSMUSG00000018574
Dlg4ENSMUSG00000020886
TF binding sites/motifs
Number: 12             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxd3MA0041.1chr11:69372072-69372084AAACAAACAAAC-6.32
Foxd3MA0041.1chr11:69372076-69372088AAACAAACAAAC-6.32
RFX1MA0509.2chr11:69371280-69371296CGTTGCCATGGCAACA-8.78
RFX1MA0509.2chr11:69371280-69371296CGTTGCCATGGCAACA+8.85
RFX2MA0600.2chr11:69371280-69371296CGTTGCCATGGCAACA-8.73
RFX2MA0600.2chr11:69371280-69371296CGTTGCCATGGCAACA+8.78
RFX3MA0798.1chr11:69371280-69371296CGTTGCCATGGCAACA+8.67
RFX3MA0798.1chr11:69371280-69371296CGTTGCCATGGCAACA-8.93
RFX4MA0799.1chr11:69371280-69371296CGTTGCCATGGCAACA+8.29
RFX4MA0799.1chr11:69371280-69371296CGTTGCCATGGCAACA-8.78
RFX5MA0510.2chr11:69371280-69371296CGTTGCCATGGCAACA-8.63
RFX5MA0510.2chr11:69371280-69371296CGTTGCCATGGCAACA+8.78
Number of super-enhancer constituents: 2             
IDCoordinateTissue/cell
mSE_04638chr11:69370714-69371614E14.5_Brain
mSE_04638chr11:69372802-69375838E14.5_Brain
Enhancer Sequence
GAACCTACAG GGAAGACAAG GTAGGCAGGG AAGAGGTGTC AGGGGTGTGG CGCCCAAAGC 60
TTTCCCTCTC TCACTCCCAA CCACCTCGGA CAGCAATTCT TAGCTCCCGC CCATTGCCTT 120
TGTTTGAGTC CTGTGTTCAG TAAGCCCGGG AACTAAGGGC TCTGCAAGCT CACATCAGAA 180
GCAGCAGGAA GCCAGGCTCA GAGGTCTCTT GCCCCTTGGT GTGCCCAAAT GCACTCTTCA 240
GCCCGCCCTC ACCACATGCA CACTGCCATC TCCCGCTCCA TCACCGGTGC CGTTGCCATG 300
GCAACAGGAT GCCAGTTACC AAGGAGCTGG CCTCTCTGGA ACCACACAGC CTACCCCTCC 360
CAGGTGATTT CACTATTCCA TGGCATTCAA CCATGGGGAT GGAACCTCCC CCTCCTCCAG 420
GCCACCACTG AATTTCAGGG CAAAGGGGGC AAGGTATAGG TTGGGGTGGT GGTGGTGGGG 480
CTGGGATCTG GGATCCAAGT TAGTCAGTTA ATGAGACATG AAGTAAATGC TAGTTTGGCA 540
ATGACCAAAA TGGGGCTGAT GAGAATGGAC GCATAGATGC CAATCACTCT GATCATTCTT 600
CCTGCGTTCC ACCTTGGGGC TTAAACTTTC TGAGGAAAGT GTTCTCCAGT TGAGGAATTG 660
AAGTAGTTGG CTTCTGTCAC TACAGCTGAC ACAAACTACT AGCAGCATCT CCATGCCCAG 720
TTAGCCAGGG AATGGATGGG CCCAGCACAG CCACAACCTG CCTACCACAG CAAGCCCCTG 780
CCTGTGCATC CACAGTTGAA ACCCGGTTCC ACAAAGCTGT TGCCCAGCAT CTTCCCAGAT 840
TCGTACTGAC CAGCTCCCAC CCAATACCCA AAAGAACCTC AGAAAGCCCC AACGCCTTGT 900
CTCTCTCAAC CCTAACAGGA TAGCCCATTT ATATCCTCAA GGTATACTTA GTGCTCAAAA 960
CTGCAGCCAG GAGTTGCTGG CAGGTGGGAG AACTTGTGAT TGACTATTCC CACTGAGATA 1020
TAGGAGGGAG AGGAGGTACC AAGATTGGAA TAGGGCAGGA AAGCCAGGAA GCAAAAAAAC 1080
AGAAACAAAC AAACAAACAA AAAAACCAAT CCTACCTCTC CTTTCATGAA TGAGTACATA 1140
ATATGTCCAA ATACCTTGCC TCCAATCCTC ATAACAGCTG TAAGGACTGA AGATACAAAC 1200
TCAGAGAGGT TAAGTGACAT GCCTAAGACC ACACAGCTTT CTGCAAAGAG CAGGGCTAGT 1260
GTTAAGACCA AGTGCCTGAT AAAGTCTCAG GTCCACTCCC CCCTCCCATG ACCTCTCACA 1320
ACCGCCCCAG CGAAGGAGGA AGTTTCTGAA ACACAGAACT CTTGGGCTGG TGGGGATAGG 1380
AAATGTCATG GAGACAAATC ACTTAGATGG CCTCCCAGAG GTTCTGTCTG CCCTGTGTGA 1440
CTGACTGACC CTTGGCCTCT TTCCAAGCAA AGCTAGCATG TCAGGGACCG GAGTCCCCGA 1500
TGGGAGAGTT TGCGGTCGGT CAAGATGACT GGAGAGGCCA GTGGCACCCT CAGGACTCCC 1560
AGTGGCAGGA GAGAAGGAGG GGGCTTTGAG GGGCCTCCAG AAAGAGTCCA CCAAACCAGG 1620
AAGACAGGAC CATGTTCTAG TTGCCAAACT GTTCAACCAA AGGGTCAACT AGTCCTCTGG 1680
CTGTGAACAC CAGTTGGGAA CACAGACTGA GAGTCAAGGA ACCTTGGGTG GGTTGTTCTA 1740
TAGCCCCAAA CTGAACCCCC TTCCCCCTCA TCTGCAACAC CGAGTGCCTC CTGGGAGCTA 1800
GGTGTCCCTG CCCTTCTCCT CAGTGCCTCA GCAGCACCCA TTCAGCACCT CTCTCCCGAG 1860
AGCTGACATT AACCAGGCTC CCTTCAACGC AGATGACACA GGTCTCCTCC AGAGCCAAAT 1920
AGCCACTCCA TTGCCCTCCC CCTGCCCGTG AACTTTATCT TTGCCCCTTT AAGATCTCCC 1980
AACTCCTGAC ACATGGTATC ACCACCCACA ACCAGCTCTG TGAGACTAGG AGTCTGGCTC 2040
TCAAGATCAT TGCTCTGTCT TGTAACCTGT CACCTCACCT CAGCGCTACA GCAAGCACCC 2100
TTCTGCCAGC CCCCTCTCAG CTCAGAATCC TAGCCCGGTT AGTCTCAAAG CTTCCATATC 2160
CCTTATCCAT GGGACTGGAA TCTCCTCAGT CCCAACCACT 2200