EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03160

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:60817230-60819340

Target genes

Number: 15
Name	Ensembl ID

Llgl1	ENSMUSG00000020536
Flii	ENSMUSG00000002812
Smcr7	ENSMUSG00000018599
Top3a	ENSMUSG00000002814
Smcr8	ENSMUSG00000049323
Shmt1	ENSMUSG00000020534
Dhrs7b	ENSMUSG00000042569
Tmem11	ENSMUSG00000043284
Gm16515	ENSMUSG00000018931
Gm16516	ENSMUSG00000042549
Map2k3	ENSMUSG00000018932
Kcnj12	ENSMUSG00000042529
Tnfrsf13b	ENSMUSG00000010142
Usp22	ENSMUSG00000042506
Aldh3a2	ENSMUSG00000010025

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX2	MA0783.1	chr11:60818916-60818928	TGACACCTGTCC	-	6.07
SP2	MA0516.2	chr11:60817735-60817752	ATTAGCCCCACCCCCAC	+	6.24

Enhancer Sequence

CGGGCTTTCA AGGCTATGTC ATGCTGCCTC ATCTCTCCTT TTAGGGCCGT TATTGTGGCT 60
CTGAGCAGAT GTGTGGCCGG ACACTAGGTT TGCTGTGTCA GAGGGATAAC TGCCACAGCC 120
TTCTTTCTCT GGTTAGGGTT GGAAGCTGGG GTCTGTGACT GGGAGTCTAA GCCCAGAGAG 180
GAGGGATCCT TAAACATCAG AGGAGTGCGG AAGGTGTGAG TGAGACCAGA TTTATGTATT 240
AAGACTCAGT TTCACAACAT GTCATGAAGG ATGTGTGGCC CTGTTCTCTT GATCACTACA 300
GGCTGGATGC CTGGCTCCTT GAGTATTCTG CAGGTACAAG GGAAGGTAGC AGGGACTGTG 360
GAGGAGGGGC TGGGCCACTA GGCTCTGATG ACCTTGGGCC CCCAAATAAG GGCCAACTAT 420
GGGAGGGGCA CACTCATTAG TGGAGTTAAC AGAGCTTAGG GAGCCAGGGG CCACCAGGGC 480
CCAGCTGCAA GGCCATTAGC AGTCCATTAG CCCCACCCCC ACTGGGCCTT TGTTCCTACC 540
CTCTACTTCC TGGCAGTGCG CCTACTCCCT GACCCTCAGG CCTCAGAGGT CCTCAGATCT 600
TTGAGGGATC CGCACCTGTC ATCTCCTGTA GCGTGTAGCG CTGGGGCAGA TCCTGTTAGA 660
ACTGTTGAGG AAAAAAATGT CAAGCTGTGG TGGAGGCCAG CATGGTGGGT AGCAGCATAG 720
GCTAGACCCT AAGTGGGGCT GCAATAGTTT CAGAGGCTAT AGGAGATGGC AAGACAAGAG 780
GGGTGAGTCT TGGGGCCAGT CAGTCAATTG GACGCTCTGT AACTTTGTCA GAGAGATGCT 840
GTAGGCTGGT CTCTCAGCCT TCCATCCACC CTCGGCAGAT GTGAAGTGCT TCCCAACACA 900
GAGGGTCTGT TTCACTCTGT GGGCCAATGG AAACATTCTT TGAGATTCAG GTCTCAGACA 960
GAAGGGTGAC TTCTTAGACT GTCACAATGA CAGGATCCAC TCCCTTTCGT TTATTCACAG 1020
TGTACATTCT GTGCCCTTCC CTGGCATGTA CAGTGAGGGA CACTGGGTAG GGGAGGAAGA 1080
TGGCTTTTTG CTGCTAAGCG GAGGACAGCC TTAAGGATGT GGAGCGCCAG AATCAAAAGC 1140
TGGCTCAGGG TTTCTGGGAT CCTTGGCTGG GCCCGGGTGT TGGCAGGTGC TGGGGACTCT 1200
AGTTGTGTGG TAGCAGAGAA AAGAGGGTGG ACTTGAATCC ACTGGAGTCA TCAGGAATTA 1260
GAGTCCTCAT GATTCTTAGA ATTAGATTAT CCTAATTAGA ATGAGAATTG AATTAGATGC 1320
ATCCCAGAAT CCTAGGGTGG AGGCTGACTG GCAGCTCAGC AGGGCCTGGC CTCTTCCTAG 1380
GCTAACTGCT GAGACAGTGA GCTGTCTCCC ACCCACCCAC CCGCCTGCCC GCCCACCCAG 1440
AAACCCCTCC ATGCTGTTGT TCCTCACGGT TACAAGCCTA GATCTGAGTC ACAGGTACAC 1500
TTGCTGGAGT CTTCAGGCTC TTGTGTGCCA AGGTATAGAA TTGGATGAAG GACATGTGGT 1560
TAGACATACA GGGAGCTTGT TAAGAAAGAA AAAATCATGC TAAGAACGGG AGTGGGCTAG 1620
TGAGCTGAGG GAAAAGCATG CGCCGAAAAG GCCCCAAGGC TCCTGACCCT TTAGAGGTCC 1680
CTGGCATGAC ACCTGTCCCT CCCACAGCTG CACAGGGCAG GCTTTTCTTG GATGTGCTCC 1740
ATTTGCTGCT GTTCACAGCC CAAGGAGGGA AGGGTTTCCT GTCTTTCCCT GAGTGACTTC 1800
TGCTTTTGTC CTGTGTTTAT CTATATACTG CTGCCTCTGC TCTCAACCCT GCTCCTTGTC 1860
CTGCTCCTCA TGGGACCAGA GAATGAACAA ACAGAATTGT CACTGTCTTG TTCTTGGCTC 1920
TCAGAGAGGC GCTAGAGCCA CCCCTGACCC CAGAAACGGA GTGCCCAAGG CAGGCTGGGC 1980
CCTGCCGAGT GGGAGGGGGT CGCATGGTAT TTTTAGCACT GCCTACCCAG ACTGAAGGAG 2040
CAGTACCAAA GACCTGTTTA AAGGAGAGGA GTCGAAAGTA CTGTCTTGGG ATACTTCCAG 2100
AGAGAAATTT 2110