EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-03120

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr11:59077050-59078810

Target genes

Number: 19
Name	Ensembl ID

Rnf187	ENSMUSG00000020496
Hist3h2ba	ENSMUSG00000056895
2310058D17Rik	ENSMUSG00000085379
A230051G13Rik	ENSMUSG00000049287
Guk1	ENSMUSG00000020444
2610507I01Rik	ENSMUSG00000085882
Mrpl55	ENSMUSG00000036860
2310033P09Rik	ENSMUSG00000020441
Gm10434	ENSMUSG00000072898
Arf1	ENSMUSG00000048076
Wnt3a	ENSMUSG00000009900
Wnt9a	ENSMUSG00000000126
Jmjd4	ENSMUSG00000036819
Snap47	ENSMUSG00000009894
Zfp867	ENSMUSG00000054519
4933439C10Rik	ENSMUSG00000072893
Zkscan17	ENSMUSG00000020472
Nlrp3	ENSMUSG00000032691
Mprip	ENSMUSG00000005417

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr11:59077525-59077543	CCCACCGTCCCTCCTTCC	-	6.19
KLF4	MA0039.3	chr11:59077090-59077101	CCACACCCTCC	+	6.32
NR2C2	MA0504.1	chr11:59078146-59078161	GGGGGTCAGGGGTCG	+	6.39

Enhancer Sequence

CAGAAGGTTC ACCCTTACCT ATGTCTGCAC ATTACATCCA CCACACCCTC CTGGAGACCA 60
CAGAAGGCTT AGGGTTGGCA GCCTGGGCTG AGTTTGTCAG GCAACAACCT CCAGATGGTC 120
TCTGTCCTCT CAATTTCCAG ACTCCAACTG GGAGATCACT ATCCGACCAC TGGTGGGAAG 180
AAGGCCCAAC TATGGCATAG CCATAATTGC TCAGACTGGC CAGAGCCTGC AGGTCATGGG 240
GCATCACCTC CCTTGGGAGT GTCACTCTCC TGTCACGCTG AGGAAAGACA AACCATCTAT 300
CTATCCCATT CCCATCCCGA TGTCTGAAAG TGCTTCCATA ACACATTCAG TGGGTGGGCA 360
TCCCTTCCCC CACCCGTGTT CAGCACAGCA GGCAGAGGGC AGACGAGAGA ACCGAGCAGC 420
CCCAGCTGGT AGCTTGCAGC CCAGGCCCCG CCCTGGCGCC TCCCCTCCAA GGCTGCCCAC 480
CGTCCCTCCT TCCCCAGGCC CTTTTCCTGG CCTCGAGGAG CCGGGCGGCC CGGAGGGGGT 540
GTCGCGGTGG CATTTGGTAA TCACACGGAG GCACAAAAGG CCCCGGAGCC ACCTGAGAGC 600
GGAATGCGCC GGTGCCCCAC CGTGGCCGCG GCCCCTGACA CCGCCCGGGC CCGCGCGGCC 660
GGGCGCCTGG CTGACCTGCT GGGGCTGATG AATCCGGCTT TGTGCGACAC TGTCACGCCG 720
CGTTAGCCCC ACAATGGCCA GCGATATTTT ATATGAATTT CCCCCTGGCC GGTGATTAGG 780
CGATCGCCGG CCAGTCATAG CAACCTGGAA GTATGCGCTG CCCGCCGCGC CGTCGGGCGC 840
GAGGGGAAAT CCTCTTTCAG ACGCTTTAAT TCAACACCCC GAAGGGCGTG TGAATCGCCA 900
ACAGCATTTT CACTTTTCCC TTGTGCTTAA TCTTGTCGTC CTCGCAGGGA CATTGTGCTC 960
AGAGCCGAGC GCAGTGGGAT ATCGGCCGGG GTCCCCCCTC CCACAGCGGA GAGTTAATGA 1020
TATACCGGAG AGGCCCCCGG AGCCAGGGGA GCCCCCCCAC CCCCAACGCA TCGTAAATGG 1080
TAACACTTTC GGATGGGGGG GTCAGGGGTC GCAACCTGGA TTTGGGGACT CTGCTTCCCT 1140
AAAAAGCTGC CCTTTCTGTC CCTCCGGAAC CCCTAAGCTC CGGCTGTCTT GCAGGCTAGT 1200
CTCATTGGAG TCGATCCTTC CATAGGCTGA GCACACAGAG AGGTGGAGGA CCACCCCCTG 1260
AGGAGCCACG AAGCTGAGGC CAGTCATCAG GAAGGGGTTT TGCCTGGGGG AGGGGAAGAG 1320
GCCAAGCTGT TGTTCCCTGC CCAGAAGCCA AGTAGGGCTT GGGGTGAGTT CAGCAGATAC 1380
TGAGAGTCTG ATGTTCAAAA GCAACCAACT CTGCTAATAG TTGTGGCAGA GGTTTGGGGG 1440
ACCCAACAAA GTCCAGCCAC TATGGGTTGA GGGTATGGCT GGCCTGGAGG TATGTCACAG 1500
GCTGGAGGAA GGGACCACAC CCAACACGAG GTAAGATGCT CTGGCTGGAG ACACTGTCCA 1560
GGCCAGCAAG GCCCAAATGA AGACTTCGCA GTGAATAAAG GTTGCCTGTA CAAGCAGTGA 1620
GCCCCCAGGA GTCCTTAGGG ACTTGGGGAG ACCACCCCCA AGTGGGGTGG AGTGTTGCAA 1680
GGTGGGTAGA AGATGCTCCT CCCTCATAGG GAAGCCAGCT AGGAGCTTCT GAGGACTCCA 1740
GGCACAGCCA CCCCCGTACA 1760