EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-02596

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr10:128415260-128416640

Target genes

Number: 21
Name	Ensembl ID

Obfc2b	ENSMUSG00000025374
Smarcc2	ENSMUSG00000025369
Rpl41	ENSMUSG00000093674
Pa2g4	ENSMUSG00000025364
Rps26	ENSMUSG00000025362
Ikzf4	ENSMUSG00000002578
Rab5b	ENSMUSG00000000711
Cdk2	ENSMUSG00000025358
Pmel	ENSMUSG00000025359
Dgka	ENSMUSG00000025357
Wibg	ENSMUSG00000064030
Rpsa	ENSMUSG00000045055
Mmp19	ENSMUSG00000025355
Tmem198b	ENSMUSG00000047090
Dnajc14	ENSMUSG00000025354
Ormdl2	ENSMUSG00000025353
Sarnp	ENSMUSG00000078427
Gdf11	ENSMUSG00000025352
Cd63	ENSMUSG00000025351
Rdh5	ENSMUSG00000025350
Bloc1s1	ENSMUSG00000090247

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr10:128416273-128416285	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr10:128416277-128416289	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr10:128416281-128416293	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr10:128416285-128416297	AAACAAACAAAC	-	6.32
LMX1B	MA0703.2	chr10:128416088-128416099	TTAATTAAAAC	-	6.14
RREB1	MA0073.1	chr10:128415410-128415430	TGTGTGTGTGTGTGTGGTGG	-	6.41

Enhancer Sequence

TATCATTAGA TCTTTGCCAT ATTGCTCTTT TGTATAATAT GTTGCACTTA TGGACTGTGT 60
AAGTAAATGT AAATAGTGAG GGTGGGAGCT GTGGCTTGGA AGTGGGCAGA GTCTGGCAGA 120
ACTCTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGGTGG CAGGTGGGGG 180
GTGAGGACTG TCTCTGGAAT TAATAACCTC TCCACAGCCC TATTCTCTCC AGCTCCCAGA 240
GCCTGGTTGC TGGCTGCAAG GCAGATGTGA GAGAACAAGT AGGTGTTTAG AGGCTTTGTA 300
GGACAACGGT CTCCTGATGT TGTAAGGATC TGGGTGTTCA GAGGACAAGC AACAGATGTG 360
GGCTCAGATC TAGTGAGAAA AGAGAGAACC CGAATGTAAT CAGGGTAGAG TACATTATCA 420
GGGAGTATCC TGTACTGGGA TCTAGGTATT TGGCCTCTGG ATTCAAGTCT CAGTTCCATC 480
TATATGGACC ACACACCACA CAGCTTTGCA GTCACTTGGC TCTTAGTTTT CTTACCACTG 540
AAAAAAGGCA GTAATAAATG CCTTCAAGGC CCAACACCAG GCAGACTTGA GAACCAAACT 600
GGGTGTTACT CGGATGCTCC TCTGCTCATT GCTGAACAGC AAACTTTTCC CTTTTTTAAG 660
TGTTGAGGGA CAAAAATAAT TATGAAGTTA CTGTGGCTGT AATTACTGCT GCTCTGTGCA 720
GAGATGCCCT CATTTACAGC AGGTAATTAC TGCTGCAGAG GCCCTGGGGG CTATGAGGCT 780
GGGGAACAGG CCTAAAGGAG ACAGGAAGCT GAGGGTGACC TCAGGGAATT AATTAAAACT 840
TAACTTAGCA GTTTGAGGGA GAAAGTATTT GCTAATCGTT AAGTTGCATC TGGTTGGAGG 900
CAAGTTAGGA GTAAATAAGA TCTGGGGTGG AGAGGCGGGT GGAGAGGCTA GTGGTTCTCT 960
CAGGAGCTCT TATTAGACAG TAAATGAGAA CTTCACTCAA CATTTTCATT AACAAACAAA 1020
CAAACAAACA AACAAACAAA AAAACCAAGC CAACCCACCT CAGCCCAGGA GAGGCAGGAA 1080
GGGACCTAGG GTCAACGCCT TTTCCAGTTG TGTGTGAGTG TCATGATCTC TTGGGAAAAG 1140
TCCAGCACAA CAGCACTATT TTAGACTCAA GAGGTCATTT GTGAGGGAAG TTTCAGCTTC 1200
TGAATCATGT TTACTGAAGT ATGAACTTAT GTGCAGTAAG ATTGTAACTT AACAGTATAA 1260
AGTTTGACAA ATGCATAGTC ATGTAACCAT AACCAATATG TATCCTCCAC AATCCCTCCC 1320
CCTTACAATT AACCCTTTCC TGATCTGTTA AAATCAGAGA TCTGCTTTCT GTCAAAACAG 1380