EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-01650

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr10:39744280-39744690

Target genes

Number: 8
Name	Ensembl ID

G630090E17Rik	ENSMUSG00000071335
AI317395	ENSMUSG00000038522
Slc16a10	ENSMUSG00000019838
Rpf2	ENSMUSG00000038510
Gtf3c6	ENSMUSG00000019837
U3	ENSMUSG00000065870
Amd1	ENSMUSG00000075232
Cdk19	ENSMUSG00000038481

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DUX4	MA0468.1	chr10:39744330-39744341	TAATTTAATCA	+	6.62
RORA	MA0071.1	chr10:39744586-39744596	ATCAAGGTCA	+	6.02

Enhancer Sequence

TTGCTCTTGC CATTATATCT GTAAAATCTG TAAAAATCAA GCAGTTGGTG TAATTTAATC 60
AAGCCACTAG AAAGAGAGCC CCCACCCCAG CCAAGTATTT CTCTGTATAA TAATTAAGGT 120
GTAGGGGACA GTGGCTACAG ATCCTGGCAT TCTCTTTTTT TGTCTCCCTA GTACTAAGAG 180
GAGCCCTACA AAGATAGATT GTAGGGGGAA ATCATGTTAG GCAAAAATCA CCCGCGCTCT 240
TGACAGTGAC CCTCGGTGAT TAGAATAGTG CCTATGTGTT AAGCGGATGA AACTGAAGCC 300
CCAGCGATCA AGGTCACACA ACATGCAGGC AGCGAATGTG AGAGTCCAGC TGGGAAGGGC 360
AGGTCCCCTG CAGGAGGCTC GCGCCCCAGC CTGGGAGGGG TGCAGCCTCG 410