EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-01256

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:180797310-180798930

Target genes

Number: 7
Name	Ensembl ID

Fam36a	ENSMUSG00000026500
Gm16586	ENSMUSG00000089788
Hnrnpu	ENSMUSG00000039630
Efcab2	ENSMUSG00000026495
Kif26b	ENSMUSG00000026494
U1	ENSMUSG00000064967
Gm16564	ENSMUSG00000089713

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr1:180797545-180797558	GGCAGCTGTCACT	+	6.04
PKNOX2	MA0783.1	chr1:180797544-180797556	TGGCAGCTGTCA	-	6.02
TGIF1	MA0796.1	chr1:180797544-180797556	TGGCAGCTGTCA	-	6.04
TGIF1	MA0796.1	chr1:180797544-180797556	TGGCAGCTGTCA	+	6.18
TGIF2	MA0797.1	chr1:180797544-180797556	TGGCAGCTGTCA	+	6.07
TGIF2	MA0797.1	chr1:180797544-180797556	TGGCAGCTGTCA	-	6.44

Enhancer Sequence

TCAGCACCCC TTAAGCCACA AGGCACAAAA CAGGCAAATG TGCAGTGTGG CTTTGACTGG 60
GTCACCTGTT CTTGTATCTG TATTGTCCTA CGATGTTGGA CAGGCTAGCC TGGGTTTGTG 120
GACATGGCAG TGTCCAGGGC ATAGATATGC TGGCTCAGAA CTGAGCTGAC ACTATCATTT 180
CTGCTATATT CTACTGGCCC AGATTCAAGG GACACTCTCA GGCCCTTACC TGTGTGGCAG 240
CTGTCACTAT GGTGGCCCCA GGAATCTGTG AATTCTTTCT TCCTGCTTCT AAGAACATCA 300
TCTCCCTGGC ACTGAGTAAC AATAAGAATG GCCCTATTCC TTCTTTCCCT TAAGAGCTAT 360
CCCTGTTACC CTGAAGTAGC CTTGGCAGCT TTGACCACCC ACTGTTGGGA GAAACGTTTG 420
CTAGATCTTG CTTAGGTGTA GATGGAGAGG ACTGAGACCT GTGGCTGAGC AAAACCTTGG 480
GCAGAGCTGT CCCTGCTGTG GTCAGGGAGG CTTCCTGCTG CGCTGGGCCC ATGGGGAAGG 540
ACAGCAGGGA GTGTCCAGGG GTCACTGTCA GCCCTTAGCA AACCACACTA GGCAAATCTC 600
CAGTCATTCT CTTCTCCCTG AAGAGCAGAA GCCCTACAGG GGAGTGTGTG GTGATCCTCA 660
TACCCTGTGA GGCCACTCCT GTGTCTTCAC TGCCCCTTGG TCTCTTTACT GGTGACACCA 720
ATGGCAGTTT GTTCTGCTTA TAACCAAAAT TCTCCTTGGT GTCTTAAGAC TCTCTTAATT 780
AACATCATGT GTGGCTAGGG TGGCTGGCAG TCTCCCGACC CCCACCTCAT TTCAAGTTGA 840
AGGTGGGCTT GTGGGCAGTA ACTTCTCCCT GCACTGGATG AGACAGTTCA GGCTAACTCC 900
AGACAACCTC TACTGTTCTA GTCTCAGCTT CAGAGCAACA TTGGCTCTTG TCACCTTAGA 960
CCTGGAAGTT GTATAAGATC TCATGGTCCT CACATAGTCC TATCCCTCCA TCCCTTGGCT 1020
AAAGGGGACC CCTGAAGAGC TGCTGAGGTG ACTGCCCATG AACAATTGAC TATTGTTGGG 1080
AGTGTGGTCT TTCAATTTCA GCTTGGAAGA GGGAAATCGA CTTCCAAATA CTTAGATCCA 1140
TTGCACAGCT GCACCACGGA GCTGAACGAC TACATTCATG GCCCAGGCTG CCTCCTTTCA 1200
GATTCCCACT GGGAGGCACA CTGCTCCAAT GGCTGCAGAG CCCTAGCATT TGATGGCTCT 1260
CAGGGCCTCT ATGAGCTCTG ACCCCAGCCC TGAGACAGAA GTGAAGGCGA AGCAAAAGGT 1320
CATGGAAAGT ACTTCTGTCC TCCTGTTGCT GCAGTGGCCT GAGATGCTAA CTAGAGAGTT 1380
TCTGGATCTC TGAGGTGGTC CACACACTTG ACTGCATAGC TTTAGTTTGC AGCTTGCACT 1440
GTCACTGAGC ATCAATGGAG AGATACAAAG AAGTCATCGA GAACCTGCTC TCGGTGTAAA 1500
GATTGTGATA ATCACACCGA AGACAAGAAG GCATGCTTAG CTAAAGAATA CCCTAAATGA 1560
CACACTGACA TGTGGCCAAC TGATGCTGTT TGCAGTGAGT GTGTGTATAG AGAAAGAGGG 1620