EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-01078

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:164406840-164407790

Target genes

Number: 6
Name	Ensembl ID

AI848100	ENSMUSG00000040297
Pigc	ENSMUSG00000026698
Dnm3os	ENSMUSG00000078190
Dnm3	ENSMUSG00000040265
Mettl13	ENSMUSG00000026694
Vamp4	ENSMUSG00000026696

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:164407312-164407332	GCGGGGGGGTGGGGTGGGGG	-	6.41
RREB1	MA0073.1	chr1:164407311-164407331	GGCGGGGGGGTGGGGTGGGG	-	7.05

Enhancer Sequence

AGAGATGCTG GTCAGTTCTG AGATGGTGCA GGAATGACAA GGCACCTGAA CATCGCAAGT 60
CCACGGTCAT CCCTGGAGGT CTCGGGTTTT CAGTCATGCC TGAGCAGTGA ATGGGTGCAC 120
ACTCATAAAC ACACCACCGT TTATTCTTCA GCTCCCAAGG CGAATGGTAG GCAAGCATCT 180
CCCCGTAAGC CTTCACCACA GGGATTTCGG GGTTCACACA CCCCGCCTCC CCTGCTCGGG 240
GCAGGCGATG ACTGTTTCAA ACAGTGTAAG CCTTCACCAC AGGGATTTCG GGGTTCACAC 300
ACCCCGCCTC CCCTGCTCGG GCAGGCGATG ACTGTTTCAA ACAGTGTAAG CCTTCACCAC 360
AGGGATTTCG GGGTTCACAC ACCCCGCCTC CCCTGCTCGG GCAGGCGATG ACTGTTTCAA 420
ACAGTAAACA GCTGAGATGA GAGTCAGGGA CAGGGGATGG GGGGCCGGGG CGGCGGGGGG 480
GTGGGGTGGG GGAGAGGGGG GTGTGGACGA AGAAGGAGGG GTACATCCCG GCTGAGAGCT 540
TCCAGGAGAG TGACAGGGAA AGGAGAGGGG TGTTGAGAAA GAGAACTGGC GACTGGAAAG 600
CACCAGGCTG CGCTTCCAGG CTGCCAGGGG CTGGCGCGCA CCAAGCCAGC GAGGGAAGTG 660
GATCCCAGGG CGTACCCCGA CTCCCCCACC GAGGGTGGGG AGGAAATGGC TTTGTATGGC 720
AGGATGAAAG GCAGACAGGG GGTCACCACC GGGTAGAGAA TGCTGGGGCG AAGGATGCTC 780
AGAGCAAGGA GGACCCCGCC CGCTCTAGAA ACACTAGTGC TCTGCCTCCA ATCCGCTGCA 840
GCCTCTAGTC CACCCTCGGG GCTCCCCACA CCGTTCCATG TTCCAACGGC CTGAAGCACG 900
GGGCTCCCCC CACCCCCACG GACGCGCCCC CACCGCGCTC CCGGTGCGCT 950