EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-01012

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:157328780-157330640

Target genes

Number: 8
Name	Ensembl ID

Stx6	ENSMUSG00000026470
BC034090	ENSMUSG00000033722
Xpr1	ENSMUSG00000026469
Gm5532	ENSMUSG00000073535
Acbd6	ENSMUSG00000033701
Qsox1	ENSMUSG00000033684
Tor1aip2	ENSMUSG00000050565
Tor1aip1	ENSMUSG00000026466

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr1:157328897-157328913	GCATAAGTAAACAATC	+	6.2
Foxj3	MA0851.1	chr1:157328898-157328915	CATAAGTAAACAATCCC	+	6.49
Foxq1	MA0040.1	chr1:157329490-157329501	TATTGTTTATT	+	6.62
RREB1	MA0073.1	chr1:157329203-157329223	CCCCACCCCACTCCCAACCC	+	6.5

Enhancer Sequence

AAACTGGCTG ATGTGTGATA CTCTCCTGAG GGCAGATCTC TTATCTGAGA AATTGTCCCA 60
TTTCTACAGG TCCTAAGAGT TCTTTTTACA GGGCTGCGAG CCCAGTGTCT GCTATATGCA 120
TAAGTAAACA ATCCCAGTAC TTGGGAAGCA GAAGGGCAAG CCCAGTCTTG GGCTACAAAA 180
TGAGTACCAG ACTAGCCAGG ACAACATAGC AAGACCCTAT CGCAAAACCA AAAACATCCC 240
CTAAAACAAC AACCGAAATC TTTTCTCATT TCCTTTCCCC ACTTTTCTTG GTTTAAACTT 300
AACCTTTCCT GTTGTATTCA GGTCATTTAA AGAGAATCTA AAAGGATAAC TGGACCACTT 360
CCAACCACAG TGATAATCAC CCACTTTTTC ATTCTCCTTT TTTACCCCTC CTTTGGAGAC 420
AACCCCCACC CCACTCCCAA CCCCTCCGAG GAGATGGACG CCACAGCTTG TATAAAACAT 480
TCTGGCTCCG AGTCAAATGG GCAGTGCAGG AGCGTGTAAA AGGGATTCAC TCGCCACATG 540
AAAGCATTCA TTTAAGCAGC ACATGGCTTC GATCTCTTTA TTACCTTTCG GGAGGGTAAA 600
GCATTAGAGG ACATAAAGGT ATCATTACTG TAGGAAAACT GCTGAATAAG GAACGCCCCA 660
GTGATAACAA CTCCTCGAAA CTGCCCTGGT GAACAGGAGA TAAGGGAAGC TATTGTTTAT 720
TGTGCCTGCA ACCTGTTTGC CATACGGGGA CTATACATGC CTTGCCTAAA CAGGAGCAAT 780
CATGACATTG TAACCTTAAA CAAACACTTA CAGCTCAGCC ACTTGTTCGC CATTTGTAAT 840
TGTATCTTTA GACAAGGCTG CAGCGACTTC ATTCCAACTA AAAGATTAAA AGATTTCTGA 900
AGATGTCTGC GAAGCCTTTG TTTCTGCATG TTTATGTGTA AATTAGGCTG ACATTAACAC 960
AGAGTCGATG TCTCTAATAA ATATTCATCG AAGGAGTGGG TGAGTAGAGA CAGACTCCAC 1020
TGGTAAGGAT TAATAAAAAC ATTTTCCCAG GAGGAGGCAG AGAAATAATG TCTTTACACT 1080
CTGTCTTTTG CAAGTACCCA AGAATTGTGT TAATAAGCTT GGGGATTTGG AGGAGGAGAT 1140
ATACCACACA CCTCTGAAGG TGGGCTCATG ATGGAGGTTA GCAAGTCAAA AGAAGCTGCA 1200
GCTATTCTTC AATTCAAAAC AGCTGTGTTA TTTGTCTAGC GACAAACACA CAGCAGGCAA 1260
GAACACTGGA TTTAATTTCC ACGTGTGTTA CTCATTAGCT ATGGGGTTTG GCATGTCATA 1320
CCATGCGGTG TCTGCTTTCC CGTTTGTAAA GTACACGCAT CTCACAGGGC CTTTCTGAGA 1380
ATTACATATT TGGCATAATT TGGACCTTAA GTGCCTGCCA AAAGTCTGTG GAAACTTTTA 1440
ACAAGTGGGA CCTACTGAGA GGTCTTCTAC TAATTGAGAC TATGTCCTCA AGTGGATAAT 1500
GGAACTCCCA CCCAAGCCCT CTCTCATTCC TATCCACGCA GTGAGTGGTT TTTGCTATGC 1560
CACGGGCTTG CACTATAATA CACCACCACA GGCCCAAAGA CTGGACTTCA GAAACTTAGC 1620
CAAGTACTAT ATATATATAT CAAATGCAGC ATAAATATTT GTTGTAAGTG TGTGAGTGCC 1680
TACATGCCAC AGTACATGTG TGGAGCTCAG AGGACAACTT TTAGGAGTCA GTTCTCTCTT 1740
TCCATCATTC AGATATTCAG ATCCTGGGGA TCCAGACAAG TCGTCATGCT TGGCAGCAAA 1800
CACTTTACCT AACCCTTGAA ATACGTCTTG ACAGCCCCCA TAAACCTTTG CTCTTTATAA 1860