EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00866

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:137386930-137388720

Target genes

Number: 14
Name	Ensembl ID

Arl8a	ENSMUSG00000026426
Gm4204	ENSMUSG00000079139
Elf3	ENSMUSG00000003051
Rnpep	ENSMUSG00000041926
Timm17a	ENSMUSG00000062580
Lmod1	ENSMUSG00000048096
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879
Gm4793	ENSMUSG00000054412
Nav1	ENSMUSG00000009418
Csrp1	ENSMUSG00000026421
Phlda3	ENSMUSG00000041801
Lad1	ENSMUSG00000041782
Tnnt2	ENSMUSG00000026414

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:137388099-137388110	TGTGACTCATC	+	6.14
JUND	MA0491.1	chr1:137388099-137388110	TGTGACTCATC	+	6.14
ZNF263	MA0528.1	chr1:137387986-137388007	TCCCTCTCCCTCCCGTCCTCT	-	6.37

Enhancer Sequence

CATACAGATA TATATATATA ATCATTCTTT AGCTTGTGGG CCATATAAAA CAGGCAGTAA 60
GGCAGAGCTG GCCCAGTGGA CCTGAGACAG ATCTGAAAAG ACCCTGAAAG GGGTATAATG 120
GCACACACCT GTAATCTCAG TGATTGGGGG CAGCGTCAGG AAGATTTGTC AAGTGTGAGA 180
CCAGCCTGGG CTTCATAGCA AAACCTTGTT TCAAGAAACA ATCCAAGAAT CAAACAAAAA 240
GCTCTGTAAA CCAGACAAAC CCTGACAGAA AAGCAATGAC TTCTTAGCTT TCAACTTTTT 300
ACCAGTCTGG AGCCCTTCTG ACCTAAGCTG TCCACAAGTC CCAACAAGAC TGCCAGGAGT 360
GTTACTAGTT CCATTTGACT CAGGGACCAA GGGGTGGGGG AGGTGCCAGG CAAGAAAAGA 420
AGCAAAGAGG CCTTAGTGTT GCCTGCACCT CACTCCGGTC CTCCAGTCTA GAAGCAGGTG 480
ACAGCTTGAA GCGGGATGGA ATTCAAGCCT ACTTACTTGT ACCTCATGGA ATGAATCATG 540
TAAGATTGAC AGGGACAAAA GCCCCTTTTA GTCAGAAACG CAAATCCTGC CACATAGACA 600
GGTTGGAAGA AGTCATGTAC AGTGCCGGTG CCCTGCACAT GTTCTAGGTA CACGTATGGC 660
ATCAGATAAG AGTCCTGGAT ATTAAATGGC TGTCATTCAT CATAACCTGC CTCAGTTAGC 720
GGAGTGAGTG GTAGGAGGAG CTGGTGGGAC AGGATGTGGG CCCTCCATTC ATACCCCTGG 780
CTCAGGAATC CCTCACTAAG CGGCTCTGGC AGCCCCTCCA AGAGCTTGAG GCCAGGCTAC 840
TGGTGTGAAC TGCTGATCTG GCAATAAACA CCTAGACCCT GGGAGCTGCA CTCTGAGGAG 900
TGAGGCTTCC TACCACAAAA CAAGCCAGCT GCCGGGCATT CCCTTTGCAT CTCTCTCTCT 960
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCCCAGGAT 1020
GTCCGTTTTC TCCTGTCTCC TTTCTGTCAA GAAGTCTCCC TCTCCCTCCC GTCCTCTCGC 1080
ACAGTGCTTC CACACGCATG CATGGACAAC ATTACCAAGC TTCCTTGTTT AACCAAAAAA 1140
TTTTGTATGT TGATTCCAAA TACAGAGCTT GTGACTCATC CAAGCTTTTC TGCTAATAAT 1200
TACCCTAATG CTGTCCACAT TTAATTTACC AAAGAAAAAC AAAATAAGGA ACATTAAAAA 1260
AAAAATCAGC AAAATAGAAA CAAATTCCAA ATTCAAAACC TTTCACAAAA AAACCCTCAA 1320
GCCCGTCTGT GCAGACGTCA CCATACTAAA GGCCAGGACA ACTCCTGGGA GAGAGGAGGC 1380
TTGGGAAGGT AGGGTCTTGA TTCAGTCAGG GGCAAGCAAT GTGCCAGTCT GATGTATACC 1440
TAAAACAAGG CCATCCGAAC CCTGGGGCTC ACCATAACCA CAATTACTGA AGTGTTTATT 1500
GCAAGTTAAA CTATGTGTTT TCCATTTCAA AAACAACAGG GATAAACCAA CCCACTACAA 1560
AGTACAACTG CTTCTCTCAG GAAGCCATTC CCTTGAGATG TCTCGGGAGA CATTCAGAGA 1620
ACAACCTTGG ATGAAGAATG CCATTATAAT ACAAGTCAGA TACAGGGATC ACACAAAAAT 1680
AGTTGGTGCC CTTTCTCTAA ACACAGAAGG AGAAAAACAA ATATCCCAGG CTATTGGAAG 1740
AGTTAGAAAT GAGATAACAG ATGAGGACAC TTGGCACAAC TCAGCCTGTG 1790