EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00800

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:134842300-134843760

Target genes

Number: 5
Name	Ensembl ID

Nfasc	ENSMUSG00000026442
Lrrn2	ENSMUSG00000026443
Mdm4	ENSMUSG00000054387
Pik3c2b	ENSMUSG00000026447
Ppp1r15b	ENSMUSG00000046062

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr1:134843340-134843355	AGAGGCCAAAGGTCA	+	7.28
Nr2f6	MA0677.1	chr1:134843341-134843355	GAGGCCAAAGGTCA	+	6.76
RXRB	MA0855.1	chr1:134843341-134843355	GAGGCCAAAGGTCA	+	6.21
RXRG	MA0856.1	chr1:134843341-134843355	GAGGCCAAAGGTCA	+	6.09
Rxra	MA0512.2	chr1:134843341-134843355	GAGGCCAAAGGTCA	+	6.36
ZNF263	MA0528.1	chr1:134843264-134843285	GGGGGAGGGGAAAGGGAGAGA	+	6.84

Enhancer Sequence

GGAGCTCTGC CGTACTCTCC AATATCAATT CCTGAAGCCC ACTTTGAGGC CTCTTTCTCC 60
AGTTCCCAAC AGCTGAATGA CCAATGCACC AGGAAAGGCA GAGGAACCCC ACGACGCCAT 120
ATGTAAACCT AGCGCAAGGC TCTCCCTCTC AGTCAGAGAG ATCAGAAGCC ATCATCCCCA 180
TTCTCCTTAT GCCCTCAACT CCTCGGCTTT CTGACTCACT CCTCTGCAGG TGGGTGGGCT 240
GTGTGCACAC ATGCAGGTCC ATGTGCTCCC GTGAACACAC ACACACTTCG TAAATGTCAC 300
AGGCGACTGT GAGCCAATCT CCCTCTCTAC ACTCCATCTG CCAGAAGCTA TTTTAAGCAC 360
CTAATAAAAC CATTTTAGAA AGATTCCTGG GGTGATCTGC CCTTTGCTTT CCCGAGGGCA 420
AGAGCAATTA TGCTCCAAAT GGAGCTAAAC TTTGCTGCAA AGCCAAGACA GGAGAAAGAG 480
ACCCCAGTGA CCCACAGTGA GAAGTGTTTA TGTTCTGTGA GGGTTGTGGG CAAAGAGGGA 540
GGACAGACCA GTCTGGGCAT GGACATTCAG GTCTCTGTGC TGATCCTTAC CGCCCAGTTT 600
TCCTTGCGCT AATATCTAAG TCTTTCCACA TCATCGATGA GGGAGTGGGT TATACCTCAG 660
GCTGGAGCGT GGGGGCTTGA GCAAGCAGTC ATCAAAAGGT CCTGGAAGAT GTTATAACAC 720
AAAGCCCAAG GTTCCTATTC CCTAAGTGGA TGGCAAAACT TAAAATTTTA CATTTCTTAT 780
ACATGTTCCC ATGATATGAC CGATTCTGGG ACCACGTTCT GTCAGCTTGC AATGAGACAC 840
AGGTAAAGCT TTGGGCACGC AGTAAACCTT GGCAGGTATG GAATCACCTG AGGAGATTTA 900
AATCTCCTGA TGCCAAGTGC CACAGACCAA AGGCTCTAGA TACAGACATT GCTTCTGGGA 960
GGGGGGGGGA GGGGAAAGGG AGAGAGGGAG CGTCTCAAAT GTGAGCACTT GTACACATAA 1020
TCACATGCAC ATAAGTATGT AGAGGCCAAA GGTCAGAGCT ATATATGTTC TGATGCCTGG 1080
GTGGCACAGT ATTTTATAGA CAGAGCCATT TCCACATTCC CTAAATGTTA CTTCTTGTTC 1140
AAAAACCACC ATATAAGTTA CTTAATAGCT TCTGTATGGG CCTGAGAGTG TGCTATTTTG 1200
TTACATGTTT TTAGACAAGT TCCCACTGTC TAGCCCAGCC TTGCCTAGGA CTTGAGATCC 1260
CTCCTGCCCA AGTGCTAGAC TTACAGGTGG GAGCCACAAT ACCTGGTTTG TAGAGCTCAG 1320
TAAATTTTAA ATGCCCTGTC TGAGATGCCC AGCTCCCCTC CTCTCAGGGT CTCTGTCCCC 1380
GTTTCTTTCT CTAGGGCTCT ATGGTCCACT GCAGCTCCTA CAGGGAAGAC TTGCCACTAT 1440
GGAGGATTTG CCACCGCAGC 1460