EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00641

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:93665920-93667810

Target genes

Number: 8
Name	Ensembl ID

Ube2f	ENSMUSG00000034343
Ilkap	ENSMUSG00000026309
Hes6	ENSMUSG00000067071
Per2	ENSMUSG00000055866
Traf3ip1	ENSMUSG00000034292
Asb1	ENSMUSG00000026311
Twist2	ENSMUSG00000007805
Hdac4	ENSMUSG00000026313

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:93666866-93666884	GCCACCTTCTTTCCTTCC	-	6.23
KLF14	MA0740.1	chr1:93665980-93665994	CGCCACGCCCACTC	+	6.1
NKX2-3	MA0672.1	chr1:93667244-93667254	ACCACTTGAA	+	6.02
SP1	MA0079.4	chr1:93665978-93665993	AACGCCACGCCCACT	+	6.1
SP3	MA0746.2	chr1:93665980-93665993	CGCCACGCCCACT	+	6.92
SP4	MA0685.1	chr1:93665978-93665995	AACGCCACGCCCACTCG	+	6.09
SP8	MA0747.1	chr1:93665981-93665993	GCCACGCCCACT	+	7.22

Enhancer Sequence

CCAATAGAAT GCTTTTGGAA AGTGGTTTTG AAGTGTAGAT TAAAAGTGAT CACTCAGCAA 60
CGCCACGCCC ACTCGTCTTC TTTGGGGGGG ATAAGGAAAG TGGAAACAGT CGGGCCTGAA 120
GGCGTTCATC ACCACCTCAT TTATAAGGAG GAAGTCTGAA CACAACCCGC GTGTCCATCA 180
CCAGATGCAG ATCTCCAAAT AAATACCAGA AAATTAGTGA TGAAACCCTA CACTGCCCGT 240
GTAAACTATT CCCCAAGAGT CTGAAATAAT TGTAGGAAAT GTACCCTGTC CTGTTAGCTA 300
AAGTGGGTAA GACTCACAAG GCTCCTTTTA AGAGGCTACA TTGAGGATGC CTGGGGTGAT 360
CTTGTTTGTT TGTTGTTTAT GGTTATGTAT ATGTATGGGC TATAAGCCTG TAGGTGTTTG 420
GAGGATGTTT CTGGATTATT TCCTTGATAT GGAGTCTCTC ACTAAGCCTG GAACCTCATC 480
CCCCACTGGT GTTATAGGCT CACGCTCAGC TTTTTACATG AGTGTTGGGG ATTTGAACTC 540
AGATCTTCAT TCTTGTGCAA CAAGCACTCT TACCTATGGG CCCATCTTCC CAGCTCCTGG 600
TGTGGGTACC TCCGAGTGAT AGATTATGGG CAGTCCTCCA CTGATACTTG CTTCTGTATT 660
CTCCACATCT CCTATCTTGG GTGTATGGTT ACTTTATCAA AGTCACAAAA TATATTTAGA 720
GCACCTGGCA GAAGGAATCA GAGGACCTGG CGGGCGGGGC ACCCTGCCCT TTAATGATGG 780
CAATCAGTGC CTCCCACAGG AATGGAGGGC AGAGGTGTCT GTGGGGAGAG ACTGTGAGCC 840
AAGGACTCTG AGGACAGAGT TTGTCCCGGA ACAGATGTTT GGTTAGCGGG TTCCAGATGA 900
GCACAGGCTG TCTCCCTTAA CTCTATGCCC CCAGGCCAAG GAGCCTGCCA CCTTCTTTCC 960
TTCCGCCAGA GGACTCAATC TCAACTCAAA GAATCATGAT GGTGCACTGA GGCTGCCAAG 1020
AGGAGACCAA TTAGCACAAA GTAAATATTT CTCCACCAGG GAAGTGGACG TCGGCCACCA 1080
GAGCACTTCT CCGAGGGCAA AAAACACAGG GTTTCCTGCG TCCCGGGCCA GCTGCAGCCA 1140
GAGATGAAAG AGACCAGAGC GCCTCTCCAC AACCTCCTGG GCTAGGGCCG GCCGGGCAAT 1200
TAGACTTCAG CATTTATTTA TGGAGCTAAT TTTGTGTGTA CCGCTCCTAT TTCCGTCAGT 1260
AGATAAAAAG CAGAGATAGT TGGCTTGGCA CTGGCCTCGA ATACTCTGGG AGCCCCAAGA 1320
GGGGACCACT TGAAAGCAGA GGGATTCTGC AGGGAATGGT TGTGAATTAG GGTCGTGGAA 1380
TTCCACTCCA CCACAGCTCC AGACTCCCCT TTTGCCGTTA TGCCTTCCTC CCGTGGATCT 1440
AGGGAGGGGA TATTTATAGG ATTCCCACCA TTTATGGGAG GCACTTCTAA GAGAAAAAAT 1500
AAGGCGGGGG CGGCATGCTC ACCTAGTAAA AGCTAACGGT CATGGTTGTT TACTCCCCGC 1560
CCCCCACTTT GCTCCAGCCC TGCAGCTGGC TGCATCGCCC TGCCCCCCAG CACACCGGGT 1620
TAGCAGCATC AACCCTCCTG TGTCTCAGAG TCGATCAGTA ATTAGTGACT GGAAGCCCTC 1680
CTGCCCTGAG TACAGTAGGC AGGTGTTCCC TTGGAGGCCT TCTCTGAATT ATCTGATGGA 1740
TCCCTGACAG GGTTCACGGA CAGTTAAGTC ACGCGGGACA GTGGAGAGTT CGAACACCTA 1800
CCAGGATTGG TTCTCCCAGA GCTTTCTCTC TTGCCATTGT AAACATTATA TTTACAGTCG 1860
ACTCTTAAAG GCCACACCCC GAACATCACA 1890