EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00404

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:74148680-74151690

Target genes

Number: 6
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Arpc2	ENSMUSG00000006304
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Slc11a1	ENSMUSG00000026177
Rqcd1	ENSMUSG00000026174

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:74150667-74150685	GGGAGCAAGGAAGGAGGG	+	6.88
EWSR1-FLI1	MA0149.1	chr1:74151150-74151168	GGACAGAAGGAAGGAAAG	+	7.24
Foxo1	MA0480.1	chr1:74149685-74149696	AGTAAACAGGA	-	6.32
NFIA	MA0670.1	chr1:74149545-74149555	ACTTGGCACC	-	6.02
TBR1	MA0802.1	chr1:74149097-74149107	TTTCACACCT	-	6.02
TBX20	MA0689.1	chr1:74149097-74149108	TTTCACACCTA	-	6.14
TBX2	MA0688.1	chr1:74149097-74149108	TTTCACACCTA	-	6.32
ZNF263	MA0528.1	chr1:74150676-74150697	GAAGGAGGGTGGTGGAAGGGG	+	6.12
ZNF263	MA0528.1	chr1:74150412-74150433	GGGGGAGGAGTGGGAGTGGGG	+	6.76
ZNF263	MA0528.1	chr1:74150904-74150925	GGAGGAGGGAAAGATGGGGGG	+	7.74

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11501

chr1:74148148-74151761

Placenta

Enhancer Sequence

CAGACAGAGA GGAGAGAGGT ATGTAGGTAG CTTCAGAGGC CAAAAGATGA CAGATCCCCT 60
GGATCACAGG TAGGTGAGAA CTGACCTGGA AGCAGATCCC AACCCCAGAC AAGGTGAAGG 120
CCATCTGTGA TCTACCCACC CCCACATATC CACATATTCT TAGATCAGGG CCAGGGGAGT 180
CCCCTTTTCC CATAGCAAAT CAAGGCAAGG AGGATAGGGT TCCTAGAGGG GCCAGTACAG 240
GTGTCAGGAA ACAAGAGAGC AGGTCACTGC ACAGCTGTGC CCTGGGACAG CCGTGGGAGG 300
AGGGTCTACC TGGCAGCCCA GCACAGAGTC TCCTCTGTTG GTTTTGTCTT CCAGGACAAA 360
GGCAACTCCT GTTAGAGGAG AGTCCCGGAG CATTTGATCT CAGGCTCCCA GACTCTCTTT 420
CACACCTAGA AAGAGGTGTG CAGGCATGGT TCCCTGGGGA CCTCCCAACG CTTCCCCAGG 480
AAGGGCTTGG ATCCAGTAAT TCCCCTTTTC TCCCTACTCG CCACCTGCTC ACAAGAGCCA 540
GTGTCCCTAC CCTCTCTTGT GATGCCCCAA GGGCCCCAGG AGGTTTGCAG TCAAATTCTC 600
CCACCCTCAG GTTGGGCTCC AGGTCCTTCT GCTCCCCCAG GGTCTACTCA ACTGTACTCA 660
CAAGATCAAC CACCCAACCA GGCCCAAGGC ATAGAACTCA CACCCAGCCC CAGGCCACTC 720
TGCCTACAAC AGAACAGACT CCTGCAGAGT AGACCTGACT CACAGGGACT CAAGTGGCAA 780
CAGCTCTAGG CAGCCTCCTC TGGCCAGCCC ACAGGAGTCC TCCTCCAGTT CTTCTGTGGG 840
CACTGATAGC TCATTCCCTC CTTGTACTTG GCACCATTCC TTGTTGATAT ATCTGCTGGC 900
TTCTTCATTC TCCCTTTCTT CCCCACCAGA AGGCCAGCTC TAGAGGCCAC TGTCCACCAC 960
TCTCAGGTGC ACCCTAGTAC CCAGCACAGG ATCCGACAAG GGGACAGTAA ACAGGAGCTC 1020
ACTTGAGGGG GGCACAGGGA GAAGAGAGGG AGGGATGAAG GGTGAAACAT CCCTTCCAGA 1080
TTCCAGATCC AGGCCATTGG TCACTTTGAG AGTTCTGCTG TCACTGCAGC CAGGCCAATA 1140
AGATCTTTAT GTCCCCTCTC TACCCACCCT GACAAGAGAC ACCTTGATCT CTCTTCTGAA 1200
CCAGCCCTCT GGTGTCCACT CAAACTTAGA AATGCCCCAC CCCTTCCCTA CCCCTGCTTG 1260
TCACAGGACT CTGAGGCCCT GATTGCTTAC ACTGATTTGC TATACATGGC CAGCAAGTAT 1320
CAGTGCCAAA GCTGACAGAG GCCCCTGTTC CTGGTCCATT GCTTTTCCAT AGCATAACAT 1380
GGTAGCCAGA AGGAAAGAGG GCAATATCTG TCCTCCTAGG GGTGTTCCTT CACCACCGCT 1440
AACCCAGGTC TCTGATCTTC TACAGCCCGG AAGTTCCTCC TGATAGCTAG CCTCCAGTCC 1500
CCCTCTCAAA TTCCAAACCG TTTCCTTGAG TCTGCCTTCC TAGGGAAGAA TAGCTTGGTC 1560
ACTCTCTTCC ACACAATAAA TGCCTCCAGA CTGGCAGCAC AGTATTCAAG CCCCCTCCTC 1620
TCCCCACCCC CACCGCTCTC TGTTCCCTGG GCTGAGAATC CTGGTCCTCT GGGCCCCTTT 1680
CCAAATGATT TCCATCACCA CTCAGCGGCC TAGGACATGA TTAACGGTGG GTGGGGGAGG 1740
AGTGGGAGTG GGGACAGGCC AGGCAGGCTA TTGATCCACT AGGGACCCCC AGGGTGGGGA 1800
AGGAAGGGCA AGGGTCCTGA GGTCATCCCG GTCATCCCTT CTCCCTGGAG TGTTCTTTGC 1860
AGGGCCCAGA ATGGAGACTT CAGGCCTGGG AGCTGGGCTG CTGGGTGGGA GCCCAGGCCC 1920
CACAATAAGA TTACAGCAGG GAAGGTCTAA TTGATTCTGA TGGATCTGAG AAAGGCGGAG 1980
ATGAATGGGG AGCAAGGAAG GAGGGTGGTG GAAGGGGACC CAGAGAGCCG GGCAGGGAAA 2040
CCCCTTTTTG CATCAGCACT AGCTAATACA ATCATGGAGT GCCCTGCCCC CACCTCCACA 2100
GCCCCTCCCC TCCTGGGAAG CCAGCCACTG CCACTCCACA GAGAGGCACA GGAGCAGAAA 2160
GCTGACCTAA AGCCTCAAGA CTAGGGACCC AGATGAGAAA GAAAGGCTGA GACAGACATT 2220
CCCTGGAGGA GGGAAAGATG GGGGGCAGTC TGAGGCAGAG ACAGATCAAC AGGTTCTGCC 2280
CACCTCTCCT TAACCATGTC TCTTCACCAT TTCCCTTTCT CAGGCCAAAA CTGTAGCACA 2340
TGGAAACCTA TAAGTGGATC TTATGACTCT CATGCTCCTG CCTCAGCCTT GGCCTCAGCC 2400
TGGAGCCTAC AGATATCTGA GAACATGGGC GGAAGCCAGG TCACTGGGAC AGACCTCTTC 2460
AGGACAGAGA GGACAGAAGG AAGGAAAGGA CCTCCAAGAG AAAACGCCAA GCTGACTGAG 2520
GGAGGGACTA AACAGAACCC CACAGTCTAG AGCAGGGAGA GGACCAGCAA GTGGAGAGGG 2580
GGGCAGAGCA GGGAGGCCTA GCAGGGCCAA GCTGAGGGGC TGCGAGAAGA CGATTGGCTC 2640
CTCCCTTCTA GAAAGAGCAA GGTAGAAAAG GAAGGGACAC AGGAAGAGGG AGATGGCACA 2700
GACCAGCCAC CCAAGGACAC TGAATTGAGA AGCAAGCCAG ACCTGGCTCC ATCCACTGCC 2760
TGCAGAAACA GCCGATCCTG CCGAGATTGC CTTCCCAGGC TCAGTGCACA GGAAAGAAGT 2820
TGCTGCAGCG GGTCCAAGCT CAGGTCTCCA GATTGTTCTA GCCACCATAG TCCCCAGGGT 2880
GGAGAACCTT AGAAGGACCT GGACACGTCC AGAACAGGCT CTTAGATGGT GTGATGGGGT 2940
CAAAAGCCCA CCTAGACATA AGACCTTCCC ACCCCACAGG TGCAAGGGAT ATGACACCCT 3000
GATACCGTGA 3010