EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00383

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:73789930-73792080

Target genes

Number: 4
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Arpc2	ENSMUSG00000006304
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr1:73790530-73790544	TGTCCCTTGGGAAT	-	6.83
JUN	MA0488.1	chr1:73790922-73790935	ATGACATCATTCT	-	6.78
JUND(var.2)	MA0492.1	chr1:73790921-73790936	GATGACATCATTCTG	-	6.37
ZNF263	MA0528.1	chr1:73790841-73790862	GGAGGAGAGAGAGAGAGAGAG	+	7.01
ZNF263	MA0528.1	chr1:73790824-73790845	AAAGGAGGGAGGGAGGGGGAG	+	7.13
ZNF263	MA0528.1	chr1:73790838-73790859	GGGGGAGGAGAGAGAGAGAGA	+	7.36
ZNF263	MA0528.1	chr1:73790828-73790849	GAGGGAGGGAGGGGGAGGAGA	+	7.45
ZNF263	MA0528.1	chr1:73790832-73790853	GAGGGAGGGGGAGGAGAGAGA	+	7.72

Enhancer Sequence

TTTAACTCAA CACACAAGAA TCACAGTCAT CCTACAATGA CAGTTGTGTG GGGCACCAGG 60
GCAGGCTGCC TACCCTCAGC AAGGGAGACC TGAAGAGTCC TTGTTATTTC TCCACAGCTG 120
TGGTCACAAA CCTTGCATGA GAGTGTGTAC CATCAGAATA TCAGTAGACC CAGAAGGGAG 180
CCAAAGCAAG CATATGCTCA GTCAAGACAC TATTTGGTAG AAGGTATCAA AAAATATCCT 240
TACCTCCAAA CCCAGAGAGG TCATATCTAC AAATGGTCAC AATCACTGGA TCCCAAAAGA 300
AGCCAAATGA CACCAGTTCA GCTCCCTTCT TCCTGTTAGC TGCCCATGAT ACATCTCCTC 360
AAGAGAATGG AGACATTTTG GTCTCAAATA GTGACTATAT ACACACTATG TTGGCAAGGG 420
GGGTGGTGGC AATGGAGGTG ACCTTAACCC CCTTCTGCAA CTGCCATGGA GGAGTACACA 480
AAACCCTCTA CTCCCTCTCC CAGAAGCTGG TGGCAATGTA GGCTGCACCA GTCATGCAAG 540
GAATATCTGC ATCTACTGAG CACCTCCAGC CTCTACCCTG TAACTCGCCT ACTATCTCTG 600
TGTCCCTTGG GAATCTTCCC TAGATGGCCT GAGGTGTCAC CTGCAGCTAG AATGTCAGTA 660
GGCTTGTCTG GCCCAACATA CTTTGCACGG TCACTGTATC TGGAAACCTC AAGCCTGGGC 720
AGAAAGCTGA ACAGCCTGGC CTTGCAGACA AGGACAAAGG GTCTGCAGAG CCTGAGCATT 780
CCAGTCTCCC ACGTTCAGTG GAAGGCGGGG AAGAAAGGTC ATTAATGCAG ACGGTTTATG 840
TTTTCCCAAG CCAGCATTCC TCACAAACAG CTGTGTTTAT ACAAAGCTAG AAGAAAAGGA 900
GGGAGGGAGG GGGAGGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 960
AGAGAAGAGA AAGGACTGAG GATGTCCTGA GGATGACATC ATTCTGTGTT GTCTGCCTTG 1020
GCTGGCTGGC TCCCACGGGA GAGAGAGGGC TGCAGCAGGC TGGTGAGTGG GGTTGGTACC 1080
AGGTAAGTAT AAGCAACTTG GCAGTACCTG CACACAATTA GGAACAGCAT TTCCCTGCTC 1140
TCCCCTCTAT CCACCCCACC CCCAGCTTCC TAATATATTT ATGCAGAAAA CTCTTTTTCC 1200
TTGTACCAGC ACCCACCCTC AGAAGAAGGT TAGATTCAGG ACTCAGGTTC ACTCTTTCTA 1260
ATCTCTTCAG CAACTCCCCA ACCCCAGAAG AAAAGCCTGA CAGGAGGCAG GGTCATTAAA 1320
GTGAATTAAA ATGCATCCAA GGGGAGATTA ACCCCAAGCC ATCCCCATAG CAAACAAAGG 1380
CCTCTTTCAC ACAGACTCCA GCTCTGTAAG CAGAGATTAG GGAACAAATT CTCAGAGCCT 1440
AGAGGTAGGA GACAGGCTAG CACTTAACCT CCCTGGCTAG ACCTCAAGAA CTCAACTTCT 1500
GCCTGAGTCA GAAGCTTCCG TCTGCAAGTG GAAGGGGGCT TCAGAGCAGG ACCTGGACCC 1560
CTGCCTGAAA TACTTCATTG AGAGCCAGGT GTGTCCTTAA CACAATACAG ATGTAATGAA 1620
ATGTGACCCT TTCCTAGATT CCTGCAGGGT CTAAGGTAGG GGGTCCTCCA CAGCCCCTCT 1680
CAACCTTCTC TGCAACCCTT TTATTGAGCA CCGGCTTTGT GTCGGGCTGA GCCATGACAA 1740
AGACTTGACC AGGATAGGCA TCTTGCTGTG GAGGATCAAA TTGAGGAAGG CAGGTTGGCT 1800
GTGAGTAAAG TTCACTACAA CACAGACCGA AAGATGTGGG AAGTCTAGTA AAGATAGTAC 1860
AGATGACCCT TCATCTGGAA GGCTCAAAAG AACATCAGAG GAAACAGTGA CCCACAAACA 1920
GTCTTAAAAG AGTAGATGTT CAACCTGGTA AAGTTAGGAT GGTGATGGAG ACAGAGAAAA 1980
GGGAAGACAT TCCAAGCATA GGGTGTAGAA TGACCAAAGG CATCAAAGAT TGAAAGAGCA 2040
CATTGACTTT CCCAAGAGGA GCAAAGCATC TCAGTAGGGA TGTTGCAAAA GATAATGGGA 2100
CTATGTGCTG GTGGGAGGGG CTATGTGCTG GTGGGAGGGG TTATGTGCTG 2150