EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00259

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:58882020-58883630

Target genes

Number: 8
Name	Ensembl ID

Clk1	ENSMUSG00000026034
Nif3l1	ENSMUSG00000026036
Orc2	ENSMUSG00000026037
Fam126b	ENSMUSG00000038174
Ndufb3	ENSMUSG00000026032
Cflar	ENSMUSG00000026031
Casp8	ENSMUSG00000026029
Stradb	ENSMUSG00000026027

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:58882082-58882102	CCCCACCCCACCACCTGCCC	+	6.65
SP2	MA0516.2	chr1:58882293-58882310	GGGGGGGCGGGGGCTAG	-	6.02
ZNF263	MA0528.1	chr1:58882030-58882051	GCCCCCTCCCTTTTCTCCTCC	-	7.11

Enhancer Sequence

CCTGATCAAA GCCCCCTCCC TTTTCTCCTC CCAGTCCTGC CCTCCCACCG CCCTTCTCCC 60
TCCCCCACCC CACCACCTGC CCTGGCACAG TAAGTCACAG CAGGAGACTA AGTGCATCCT 120
CTCTCACTGA GGCCAGACAA AGCAACCCAG GTAGAGGAAA GGAATCCAAA GGCAAGCAAC 180
AGAGTCATAG GCAGACACCT CCCTCACCTC TGTGCCTGCT CCAGTTATTG GAGAACCCAC 240
ATGAAGACCA AGCTGCACAT CTGCTACATA TGTGGGGGGG CGGGGGCTAG GTCCAGCCCC 300
ATATGCTCTT TGATTGGTTG TTCAGCCTCT GTGAGCCCCC ATGGGTGCAG GTTAGTTGAC 360
TCTGTAGGTC TTCGAGTGGT CCCCTTGACC CCTCAGGCTC TTTCAATCCT ATCCCCCACT 420
CTTCCACAAG ACTCCCCGAG CTCTGCCTGA TGTTTGGCTG TGGGTCTCTG AATCTGTCAG 480
TTGCTGGATG AAGCGTCTCC GAAGACAGTC ATGTGAGGCT CCTGTCTGCA AGCAGAGTTT 540
CAAATAAGTA TTTTAGCTCT TCCTCTTCTT TCTTGTTAAA GAAAGTTAAG ATGACAGAGG 600
TTTAAAATAG TCTGGGGACA CTAAGGAGAA CAAACCAGGA TTCCAGCAGG CTATGTGGTA 660
GCTGCTTCCA CCAGCCAAGA AGGACTGGGC TCTGGAGAAA CAACAAGGCA TTGTTGCCCT 720
TTCCCCCACG TAACCTGAGT AACTTTGTAA GTAGTCCCAC ATTTATACAT GTTCTGATGT 780
AGAAATTGTA ATATCTGATG TAACAAATTG TAACAGACAG GATTGTGGGT AATGATGACT 840
TCTAAGAGAG TCTCTGTCTA TCAGGGAAAG GACCACCCAG CCTGCCCCTG GACTGGGCAA 900
GGGGAGGGAA AATGGAGAAG TCTAGAGGTG TGCTCACTTT CAGGGATGTT TTCTCACCTC 960
CTGAAATAAG CTGGAAATAC TTTGCATTAC ACACGCTGCA GGGTGAATTC TCAGGAACTT 1020
AAAAACCGAG ACTGCAGGCC TGGATCAATA AGAAGGCAGA TTCACACATC GGTGACACAC 1080
ATGTATCTTG GTGGCTCACA TTTAAAGACA CAGAAGGGTT CCATATGCAT ACACAAGCAG 1140
GTGGGAAGGG TTGTCACTGT GGGAAGCAGC AAGACCCTAA CCATGAACAA ACACATCTTG 1200
CCCAGCCTGG AAGTGGCCAC CTTCTGTAAC CAGGCAGGAC TTCCAGTGGA GGGATAGAGA 1260
CGCCAGCCCA CCCACAGAAT TTTGTCCTGC CTACAAGATG TGTTTGTAGT CTGGGGCCCC 1320
TGCACTCAAA CATTACACCT CACAAATCTC AGGTTAATGA AAAGTGAAAA AGGCATGGGC 1380
CAGGCTGTTA GGGGACTTGG CAGTTTATAA ACAGGCTGTT GCCATATGTG AGTTCTTTCA 1440
GGGGCGGGGG TGGGGGGTGA ATGAAGATTT AGTGAGAGAA CAGAGCCCCG AGGACTCCCT 1500
GGCAACTAAT GAGATTGCAG GTGGGCAGTG GATGCATGCA AGGAGACACA GGGAATGTAT 1560
GGTGGGGAGA GCACACGGCA GCTGGCTGTG TTGAGAGCCT TGGGTGTTGG 1610