EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00232

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:55273810-55274750

Target genes

Number: 8
Name	Ensembl ID

Sf3b1	ENSMUSG00000025982
Coq10b	ENSMUSG00000025981
Hspe1	ENSMUSG00000073676
Hspd1	ENSMUSG00000025980
Mob4	ENSMUSG00000025979
Gm6822	ENSMUSG00000061863
Rftn2	ENSMUSG00000025978
Mars2	ENSMUSG00000046994

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:55274706-55274718	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:55274710-55274722	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:55274714-55274726	AAACAAACAAAC	-	6.32
Klf1	MA0493.1	chr1:55274309-55274320	TGGGTGTGGCT	-	6.14

Enhancer Sequence

TGGTGTGTAT ATGCATGTGT ATATGTGTAT GTATGTGCGT CTGTGTGTGT GTGTGAGTGC 60
ATGTGTGTGT AGACCAGGGG TCTTGTTGTC AATCTCCATC TCAAATTCAA AAGCTTTGTG 120
GAGAACTTCT TTTCATGTCG TCCCTCCACC TGAATATTTT CAACAGAGTT GGTGTTGACT 180
GTTAGGTATT CAAACCTAAT TGTTCGCACT GTGAGGCGGG CAGCGCAGGA CACACTGAGC 240
AAGGACTTTT CAACTGCACT CAGAGTGGAG TAATCACAAA TCTATGACAG GCCCAGCCTT 300
TGAGGACAAG CCTTTGGTTT GATGTCCTTA TGTAGGAAAG TAATATCAGA GCTGTAGACA 360
CACAAGATTA AGGGGGAGGA GGCGGTGGCT TCTGGTCGAT TGCCAGCACA GGCAGTGAGC 420
AGCAGCTGTA TGCTTTCTTG CTTGCCTGAG TGCTGCACAA GGTGTTGGGA AGAAGGAACA 480
CATGGTGTTT ATGGCCCTGT GGGTGTGGCT GGTTACTGGT AAATTAATGT TACATGATCT 540
GTAAAAGCCT TGCTGTATCT TACAGGGCTA TTGTTATGAA GCAGTCTGTA ACTGTTTTGA 600
AAATTATACA AACAGCAAGG GAACTTTTAT TGCTACAATT AAAACATGTT GAGGGTTGAA 660
CAACATTGTC TCTTCTCAAA GCTCCGAAAA ACGAAGTATC TGTGATGCTT TTCTTACTCC 720
TTTGGTAAAA AGCTCCAAAG AGTGACCCTT TAAATGCCAG TCAGTGGACA TGGTGCCTCA 780
TGCTTGTCAT CCCTACATGT GGGAGGCTGA CACAGGAAGA TGACCACAAG TTCTGAAGCT 840
GCCCGTGTTA CATAAATGAG TTTCAAGCTA GGCTGGCTTA TAGCATGAGG CCTTAAAAAC 900
AAACAAACAA ACAAACGAAC AAACAAACAA GCCCAAATTA 940