EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00094

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:36073470-36075850

Target genes

Number: 3
Name	Ensembl ID

Hs6st1	ENSMUSG00000045216
Uggt1	ENSMUSG00000037470
4632411B12Rik	ENSMUSG00000010453

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF9	MA0653.1	chr1:36075818-36075833	AGTTACGGTTTCATT	-	6.06
RREB1	MA0073.1	chr1:36074328-36074348	CCCCCACCCATCCCATCCCC	+	6.2
RREB1	MA0073.1	chr1:36073752-36073772	GGGGTGGGGGTGGGGGGGGC	-	6.45
Stat6	MA0520.1	chr1:36074397-36074412	CTCTTCCAGAGAACC	+	6.39
TCF7L2	MA0523.1	chr1:36073603-36073617	AAAGTTCAAAGGAC	+	6.12
ZNF740	MA0753.2	chr1:36073761-36073774	GTGGGGGGGGCAG	-	7.34

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10290

chr1:36073463-36076566

Embryonic_stem_cells

Enhancer Sequence

AAGTGTGTCA GTTAGATTTG GGGTAGGGTA GACAATTCAA GAGGACACAA GATGGGCTGA 60
CTACTGTGGA GTACAGAGTT TAATAGATGT GTTATTAACT CCATGGACAG ACAGAGGGTT 120
AACAGCATAG CAGAAAGTTC AAAGGACAGC ATCAAAGACA GACAGGCAGT CTGGCAGGGA 180
CTCTGAGGAG AATCAGGGTC CCTGTAGCAG AAGAGATCTC TGCTCACACA GTTAAGGAAG 240
AGGTTCACAC CAGGAGCTGC CAGGTTCTCT CTTCTCGGGC ATGGGGTGGG GGTGGGGGGG 300
GCAGGGAATG GGAGCGAGCA GGCTGTGCTG TGTCTGCGGT GCCAACAGTG CGGGTACCTG 360
AACATCAATT TGATGTAAAC TCACTTCCCA GGTGCGAGAT CCTGTGTGTC ATATTGTAGT 420
GGGTGCCTGT CATTGTGAAT GGGATAGTTG TACAGCAGAG GCTAGATTCT AACATTCTTA 480
CTTACACCTG TTTTATGGAC GTGTAAGCCC GCCCTTCGCT CCTGGTCAGC TGAAGGGGCT 540
GTCTGGGCCC CTTAGCAGGG TGAGTTATAT TTTATGTGAC ATTTTTGGCA GACCTGGATC 600
GTCTGGGTTT GGAGCCTGAA GCAGGCAGCT CAGCTAAGTT CCAAATTCCT CGCAGAGCTG 660
GGCCAGGAAA GTGTGAAAAC ATGCTTGGAA TTCCAAAAAT GTGCCCTGTC TGGGGCCTCT 720
GCCTGCCTTT CTCCAGACCC TCAGGGAGTC AAAGACAGGG TCTGGAGCCT CCCACCCTCT 780
GTAGACAAAG AAAGAAAAAC TCTGTCCTCG CACAAACAGG GTGATTGCTA TAGTCGTGCT 840
GGAGATGTAA GACTCCAACC CCCACCCATC CCATCCCCCC ACTCCTAGGG TCTGGAGAGA 900
TCGCTCAGCC TTTAAGAGCA CTGGCTACTC TTCCAGAGAA CCCTGGTTCA ATTCTCAGCA 960
ACCCACAGGG CAGCTCACAC CTGCCTGTGA CCCCAGTTTC AGTACTTCTA ACACCCTCAT 1020
ATATGCAGTC AAAACACTAA TGAACATAAA ATAAAAATAA ATTACACATA TTGGGTGGAT 1080
CTGCTTCTAA GGAGGAACTC TGCCCTTCAC CCTGATAATT CAGCCCATGC TTAGAACTTC 1140
AAGATCTTCA TAAGATACCA ACTCTGAGGG GCCAAAGTAC CCAGGACACA GAATATGGAA 1200
GACAGGTCAG CAGTGGACAG GGGCCAGGAC GCTGCAGGGA AATCACACTG GTTGAATGTT 1260
AGGTGTGAGA ACGAGGTCAA GGAAGGAAAA TGGAATAGTC TCAGACTTCA AAACAGCTAG 1320
AAAAAGCCTT TATTGGTCTG AGAGACTGAT GGCCCCAAAG CCAGTGCAGC CCAGTGTCCA 1380
AGGGTACAGG ACACACACGC TGTGGGGGCT GATACCACTT TTGGAGAGAG TGTGACTTCG 1440
CCAGAACCAG AAGCTGATTT TCTGGATAAA CTGGGAGGTA AATCGACTGC CTGTTTTTGC 1500
AACCTCTGTA CTGTGGATGG GAGATAATCT GTGTGCTTGT TACTAGGCTC TGGGCTTCCA 1560
GGAACTAACC ACTTTCTGGA GTTCCACGTG TGGCTGGTTT CTCCGAGCCT TGGACCTATT 1620
TCGTGGACCC TGATTTTGGA GGTGAGAGGA GTTTCCTTTC TTAGGCACAG TCTGACTCCA 1680
TGGGGGCACC TGAGATGTCA GGGTTCTTGG GTCCCAAAGC AAATGATCAG ACCGGGGGAC 1740
ACGGGTAGAA TAGAAACACA GTTTATTCAA ACAAGAAAAG CATCCCCCAG AATGGAGTTG 1800
GCTAGAGAAT AGGTCTGAGA TTCAAGAACA CCTCCTCATC CTGACCCCCG GGTGTTATTC 1860
ACAAGGTGCA GGTCTCTTCC GGGGCTCAAC GTTCAGTGCC TCTCTGCATG TGTTGTTTGG 1920
GGGCGGTTAG CCTGTAGAGG GCTGGAGGGG GTCTGATCAT CCTCCACCAT GGTTTTTGTC 1980
TTGTTCTGTT AAGGTGGATG CCTTCCCCCC AACCCCCATT CTAATCCTCT GCCACAATCA 2040
TGGGCATGCT CAGGTGGGTC CCACAGAGCT GGGCCTGGGG CCCTGGAAGA AGCATGCCTG 2100
TGAATGAGCA GTGTGTCTGA ACTCCTAAGC TCCAGTGCCA GAATATTTGG CTTCTCCTGC 2160
AATCCTCGCC TCCAGCCATG TGTGTCCAAT CTCTCTTAGG TGTACTCAAG AGAGAAAAAT 2220
CCAGTCCAAA GAGGCTTCTT AAACCTCCCT TCTCTACCCA CTCTCCCCTC CCACTTATCC 2280
CCTGCCAAGC GACAGGCTAG GGCTACAGGA TGCAGATGCT CTTGGGGAAG AGGGTGGCTA 2340
GATGTTGTAG TTACGGTTTC ATTGCTGTGA AGCGACACCA 2380