EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-00088

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr1:34806420-34808360

Target genes

Number: 6
Name	Ensembl ID

Ccdc115	ENSMUSG00000042111
Imp4	ENSMUSG00000026127
Ptpn18	ENSMUSG00000026126
Arhgef4	ENSMUSG00000037509
Fam168b	ENSMUSG00000037503
Plekhb2	ENSMUSG00000026123

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr1:34806457-34806472	TAGGGGCGTGGCTAA	-	6.71
SP4	MA0685.1	chr1:34806455-34806472	ACTAGGGGCGTGGCTAA	-	6.54
ZNF263	MA0528.1	chr1:34806780-34806801	GGAGGAAGTGGGAGGAGAGAA	+	6.22
ZNF263	MA0528.1	chr1:34807953-34807974	CCCCCTTCTCCCCCCACCCCC	-	6.54
ZNF740	MA0753.2	chr1:34807264-34807277	GGGGGGGGGGCGC	-	6.1

Enhancer Sequence

AACTCTCCCC CACAGCCCTA AAATGAGTAA AATAGACTAG GGGCGTGGCT AAGACACCCT 60
CCGAGGTCCA TCAAGTGAAA TCCGACACCA GTTATTGTTC GGAACTGCAA TTAACTTAAC 120
ACCCTGGAGG CTGTCAGCTG AGTGTTTAGG GCACAGGGGC TGGGATCTGT GAACATACAG 180
GGTTCCTGGT GATGCAGAGC CAAGTACACA TGCCAATTAG GGATGGAGGT GGCCTCAAGA 240
AATAAGCTCT CCGGATGCAA GGACAAGAGC ATGCTCTTCT GCCTTGCCCA GTGTCGTTCT 300
CATCTGAAAT GTCTGTAGCA GTCTTGAGCA GAATTACAAG GACACAGAGT GCTGTTGCTA 360
GGAGGAAGTG GGAGGAGAGA AAAGGAAGAG AGGGTCAGCT TCTTTCTATC AAGACTTCCC 420
CTCACACCTC TCAAGCTCCA GGTGAGGCCG ATGCCCCCAT CATCTTGCCT CTGATTTTGT 480
AATTCCTTAT CGCCATCCCC CAGGTATATT CCAAGAACAA GGCCCTAGAG TGTCTGGGAA 540
AAAGCAACTG ACATCCTTCT CAGAAAGGAC AAGTAACTCT TGGCTCCTTG TCACCTGCCA 600
GCGTCCCCGT TTTTTGTTTG TCACTGAACT TTGATTCCTT GTGGTCAAAC CATTTTTCCC 660
GTGACACTAT GTTTTAAAGG GTCCGTTCGT TCGTGGCACC ACTGAGGTCA AGAGGGCCGC 720
GGTCACCGCT CACCTGTGCA CGAGGGCGCA CCCAGGCGAG CGCGCCCCCA GGCCAGCGTG 780
GGTGGCTGCG GGGCTGGGGG GCGTCCTAGG TGTTACCTGC GGGGACCCTT TGATTGCACT 840
TGGCGGGGGG GGGGCGCTCT CTTAGCCCTT GAGGAGCGAG CGTCCCTCGC GCTCGCTCGC 900
CCGCTCCACA GCAGGGCGCA TTCTTCTCCC TGATGCCCGC GCGCCGAAGG CAGCGGCCGC 960
GGTGAGGACT CAGGGCGGCC CGGGGCCCGC GTCCGCGCCC CAGGTCTGCG TGCGCGCGGG 1020
CGAGAGCGCG CCGCCCGGCC GGCGACCCGC AGCGGGGCCC ACGCGCTCTG CGCCCTGCCG 1080
GGTGGCCGCC CGGCAGTGTC CAGACGGGGT CCCGCGCCCG CACCGGGGGC CCCGCGGCGA 1140
GCCTGCTCAG AGGAGCACCG CGATGTCGGG GGACCCGAAG CTACGGCAGT GCGGCGGGGA 1200
TGCTGCTGGC GACCCCGCCG GCCTGTGGCT GGAGCTCGGA GCCGCTTGCC CCGGGGCGCC 1260
GCGCTGCCCC AGCGAGTCCA GTGGCCCTAC CAGCGGCGAT CTGGGCACAA GCAGCAGCAG 1320
CAGCACTGGG GTGTCCCCGG GTTCCGACTC GGACAGCAGC GGCGTGGTGT GCAGTGGCCG 1380
CGCTGCGGGC ATGCGCGGCG CCCCGTCGCG CTCCCGGAGC CTGGAGAGCC TGCGCTCGGC 1440
CTCGGCGGGT AAGGGCACCA CCTGCTCTCC CGCACCCCCT GGCCTCACCG CAGCCTCCTC 1500
TCGCCCTTCG CAGCTTCCCC TCCCATCTCC TGACCCCCTT CTCCCCCCAC CCCCGCTTGC 1560
CCTTCTGCCG CCTTTTTCCT AGAGCTACCC GACCACCTAC CTGTCCCTTC TGAGACCAGC 1620
TAATTACCAG GGTGCTACTT GTTTGCAACA TCCCTGCTGC AGCTACCCAA TGGGGTGCTT 1680
AAAGTGAGAC TGGAAGTTGG TTCCTCTTGA CCCCTTCTTG ACTGTCTGCA GCCTCTTGTC 1740
CCCTTTCTGT GTGGGCAGCC CCCCTCACCC CAACTCCAGG CTGGGGAGTG TGTGGGTCTG 1800
AGCCTCAGAC GGAGGAGCCC AACCTGGGTG CTCTGCAACA TGAGTGAAGT TTTTTTTTTC 1860
TCCAGATGGG ATTCTCTTTG GTCTCCCTGT ACTGTGTGCC CCCTAGTGCT CCCGGTGTAC 1920
ATGAAGAACA GAATTCTGGG 1940