EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM089-00092

Organism

Mus musculus

Tissue/cell

Lens_P1

Coordinate

chr1:72290230-72291220

Target genes

Number: 3
Name	Ensembl ID

Mreg	ENSMUSG00000039395
Xrcc5	ENSMUSG00000026187
Gm15843	ENSMUSG00000085812

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:72290546-72290557	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:72290547-72290557	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr1:72290544-72290561	GAGGGGGCGGGGCATGC	-	6.5
SP3	MA0746.2	chr1:72290487-72290500	GAGGGGCGTGGCG	-	6.18
SP4	MA0685.1	chr1:72290543-72290560	CGAGGGGGCGGGGCATG	-	6.18
ZNF263	MA0528.1	chr1:72290695-72290716	GGGGGAGGCAGGAAGTGAGGG	+	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03263	chr1:72282943-72301822	TACs
mSE_10125	chr1:72288734-72291052	Embryonic_stem_cells

Enhancer Sequence

CACTAGCCTG CTAGACTCCC TGTGGAGCCA GCCTCTCAAC AAGGGAAGAT TGTCTTAAGA 60
CAACGCGAAC TAGGAGCAGT AGGTCCACCC TTCAGCCACC GTCCTGCCTC AGAGTTTATC 120
CAGTGCATCT GGCCGTGGAC ATGCCCCCTT CAGGTCTTTC TATTTCCGGT GGATTCCAAA 180
CCGCAATAGT CTGTGAGTCG GCCTGTGAAT CGCGGAGGCC GCGGGGAAGA GCTGATTTGC 240
ACGTCCTGCC TCCACGCGAG GGGCGTGGCG ACGTGCACAG GCCTAATTTG GGCTTGTGTT 300
GTCACGCCCT TCGCGAGGGG GCGGGGCATG CAAATCATAC TCGGCGTGCG CGCTCGGGAA 360
CGCCGGGAGA GCCCGGGTCG TGGACGTTGA ATCTGAAGCC GTGGGTGCTG GAGTGGGAGT 420
GAGGTGTGGA GGGCGCAGAC GCGGATCGGA GGAGGAAGGA ACCGCGGGGG AGGCAGGAAG 480
TGAGGGTTGC GAGCGGTCAC CACAAAGGTA ATGTGTCTCA CGGACGCAGA GCATGGCTGC 540
GTGGTCTGTA TTTGGTATCG CTTCTCGGCC TTTTGGCTAA GATCAAGTGT AGTATCTGTT 600
CTTATCAGTT TAATATCTGA TACGTCCTCT ATCCGAGGAC AATATATTAA ATGGATTTTT 660
GGAACTAGGA GTTGGAATAG GAGCTTGCTC CGTCCACTCC ACGCATCGAC CTGGTATTGC 720
AGTACCTCCA GGAACGGTGC AACCCCTCTG GGGAACAATG TTGGTTAAAT GTAAGACATT 780
TAGGACTATT ATAGCTCGTA AATACAGGCT GCAGTTACTT TTTCTGTCTT CTTTTCTACT 840
TTGTAGTTAC CCGGGTCTCG TTAACCCCTC TTTGATAGAC CAGGCTGGCC TCTAACTCGG 900
AAGTCCGCCT GCTTGCCGCC AGTTGATCTT TTTCTATTGC TTTACTTTTC TTATTATTAT 960
TCAGGTTTCA TATTTCCACT ACCAGGCTTT 990