EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-25002

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr9:54624000-54625400

Target genes

Number: 11
Name	Ensembl ID

Sh2d7	ENSMUSG00000046460
Idh3a	ENSMUSG00000032279
Acsbg1	ENSMUSG00000032281
Dnaja4	ENSMUSG00000032285
Wdr61	ENSMUSG00000061559
Crabp1	ENSMUSG00000032291
Ireb2	ENSMUSG00000032293
Agphd1	ENSMUSG00000035878
Psma4	ENSMUSG00000032301
Chrna3	ENSMUSG00000032303
Chrnb4	ENSMUSG00000035200

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr9:54624497-54624512	AAGGGGCAAAGTCCA	+	7.14
Hnf4a	MA0114.3	chr9:54624498-54624514	AGGGGCAAAGTCCATG	+	6.9

Enhancer Sequence

TCACTCTGTA GACCAGACTG GCCTCGAACT CAGAAATCCG CCTGCCTCTG CCTCCAAAGT 60
GCTGGGATTA AAGGCATGTG CCGCCACTTC CCAGCAAGAT ATTTTAATCT AAATAAAAAT 120
ATCACTGTCA TGAGAATAAT ATCATTAAAC ATGATGTTCT AAACTTGCCT CTATCTTTCT 180
CAGCAACCTC CGGGGTCTGT AGCAGGAAGG TCAGACTCTT TAGTGTAGCA GCCAAATCCC 240
TCCATAATTT GACTTCACTT CTAGTTGATT AACTAGCAGA ACGTGTCTTT CATCGGAGTT 300
GGCTTCAAAT TCCGGGCACA CTTTCAATTG GCAAGTGCTA CAAACCCAGC CACAGCCGAC 360
CGCAGCATAA AGAAGCTGTT CTGCTCTGAC ATGGATGAAC AGAGAACACA GACTGCTAAG 420
CGGAAGAGAC AGCTCACAGC AGACCAGTAC TGTAGGATTC CATGTAAACC GAAATGTCTG 480
AATGAGGCAA GCCCCTGAAG GGGCAAAGTC CATGGCGGTT GCCTAGACTG GAGCTGCTTG 540
GGAGAAGAGG GAAGTGACAG GTCTAGTTTC TTCTTGGGGT GATAAACTTG CTTTAAAACC 600
AACGCAGTCA TGGTTGCGTA ATTCCATACA CTAAAAAAAC CACTGAATTG TACACTTTAC 660
ATGAGTAAGC GGTCTATGGC CACCATGGTG AACACGCCTG ATCTGAATGA TGATTACACA 720
TTACATGAGC TATAGCCATA AAGTGGTTGG CTTTTGCTAA GGGAAAGTAC TGGCTCCTCA 780
GCTCGTGAAC AGTGCAGAGG CTCTCAGCAA AGAAGAGCCA CAAGAATGGA GCGTACAAGG 840
ATCCAAACCC ACAGCCTTGG GAAGCTTCTC TGTCAAGCCA CTTCGGCCAC CACTTGATTT 900
CCTTATGCAA CTGGCTTAGG TCAAGGGACC ACCCGTGAGC CAGTCGCAAC CAATGGATAA 960
GTAGCATACA GCAGATAAGC AGATATTAGT CATATGACCC CACCTCTAAC CAGATTGGAG 1020
ACTGTTCAGC AGGTAAGGGG TAGAAGTGGG TGGGTATGAA GAGTGGTTGG TACCACTCAG 1080
TTGGCTAAAA AATCCCTGGG TAAAGTGTTG AACTACTTTG AGCCTTGACT TCTTGCTTTC 1140
TGTGAAGGAA CAATGAATGA TAGTGCTGGA GAGATGGCTC AGCGGTTCAG CCATCTCTTG 1200
TAAGACGATT CTAGTTCAGT TCCCAGCACC CACATGGCAG CTCAAATAAT CTGTAACTCC 1260
AATTCCACAG GGCCCAAGGT CCATTTCTGG CCTCCCTGAA CACCAAGAAT GCTTGTGGTA 1320
TATATATGTA CATACACACA GGTGAACTCT CATACACATA AAATAGAAAT AAATCTTTTT 1380
AAAAAGAACA TTGGCTGCTG 1400