EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-23667

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr8:73315040-73316120

Target genes

Number: 25
Name	Ensembl ID

Upf1	ENSMUSG00000058301
Crtc1	ENSMUSG00000003575
Tmem59l	ENSMUSG00000035964
Crlf1	ENSMUSG00000007888
2810428I15Rik	ENSMUSG00000058833
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
2810422J05Rik	ENSMUSG00000055553
Ell	ENSMUSG00000070002
Isyna1	ENSMUSG00000019139
Ssbp4	ENSMUSG00000070003
Lrrc25	ENSMUSG00000049988
Gdf15	ENSMUSG00000038508
Pgpep1	ENSMUSG00000056204
Lsm4	ENSMUSG00000031848
Gm11175	ENSMUSG00000080058
Pde4c	ENSMUSG00000031842
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Il12rb1	ENSMUSG00000000791
Kcnn1	ENSMUSG00000002908
Slc5a5	ENSMUSG00000000792
Snora68	ENSMUSG00000077563

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr8:73315248-73315259	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr8:73315245-73315260	GAGGCCACGCCCCCA	+	7.03
SP3	MA0746.2	chr8:73315247-73315260	GGCCACGCCCCCA	+	6.57
SP4	MA0685.1	chr8:73315245-73315262	GAGGCCACGCCCCCAGA	+	6.54
SP8	MA0747.1	chr8:73315248-73315260	GCCACGCCCCCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01561	chr8:73314859-73371125	Th_Cells
mSE_04239	chr8:73314242-73316386	Cortex

Enhancer Sequence

TTTGGGTAAC AGAAGGGCAG TTTGCAGGCC AAGATAGGAG GTGCCGCAGG CAGCAAAGGG 60
CATAGGTTTT AGGGAGCTGA GCCCAGCCTG TCTGTTGCTG CAGGAGGCTC TGTTTTCCCC 120
ATCAGGACAA CCAGAAGGTG CACAAAATCA ACACACCCTG TGAAGCTGGC CTTGGGGGAC 180
CTATGCTCTA AGAGCCTGCC TACAGGAGGC CACGCCCCCA GAGTCAGCTA AGCCACAGGT 240
GTGGACACAG TACAAACCAG CATTGAGCTG GGGGACCCAC CAACTGTACC TGCTCTTCAC 300
ACAGGGAAAT CGGGGCTACC AGCTACCAAG AGGGTAAAGA ATTGCCCCCT AGGCTGAAGT 360
GTGGGTGCAG AAGCGGAACC CAAAGGGCCC TGCAAGACTT CCTGTCGCCC CCCCTCTGCA 420
CACGACACAC ACTGGCAGCC ACATCCTCTC CCTGCCCTGC TGTCCCATGG TCCTGCACCG 480
GTAGCCAATG AGACTGGTTG GTTCCTTTCC CTTATGCTTA GACAAGACCT TGAAAACAAC 540
CATATTGGAC GCCTCAGAGA ACCTGGATCA TCTCACTTGA GCACACATTA AATGCCAACT 600
GCTTACACTG TTCCTTGCTC TAAAAGGCCT GTAAGCCATG GTAGGCACCA CACTATCTCA 660
AGGCCCAGTC GAAGCTTTGG ATCGAGCACT CAGGGTCCTT GCATCTCAGA CTTTTCCCAA 720
CTATGCTAAC CTAAATACAG AGAAACACAA GCACAGAGAG GTTGAAGAAC TACCTGGAGT 780
CACACCGCAC GGTAAAAGCT ATCTTACAAT TAGAACCTGG GTCGACAGTT GAGGCACCAT 840
CTCTCTTGGC CTCTGTGCCT TGCAAAGGAG GACCTGGGCC GAGGAGAAGC ATGCCTTCTT 900
GGCTGTAGAC CTGCCACCCA CTCGTCAGTC TGGGCCATGA GTATTTGCAT CTGCGCCAAC 960
ATTTCCGCTG AGTGTCCAGA ACAGACTGCT TCATTCTTCC CAAATTCATC GCTTTGCAAG 1020
GCCCGAGTCC CAAGTTCAAA TACCGGCGTC CACAGCTAGA CCCTGCGCCC CAAGCCGTCC 1080