EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-12439

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr19:5387000-5388310

Target genes

Number: 29
Name	Ensembl ID

Ctsf	ENSMUSG00000083282
Brms1	ENSMUSG00000080268
Pacs1	ENSMUSG00000024855
Cst6	ENSMUSG00000024846
Banf1	ENSMUSG00000024844
Eif1ad	ENSMUSG00000024841
Sart1	ENSMUSG00000039148
Tsga10ip	ENSMUSG00000039330
Gm6293	ENSMUSG00000051133
Drap1	ENSMUSG00000024914
AI837181	ENSMUSG00000047423
Fosl1	ENSMUSG00000024912
Ccdc85b	ENSMUSG00000042878
Fibp	ENSMUSG00000024911
Efemp2	ENSMUSG00000024909
Mus81	ENSMUSG00000024906
Snx32	ENSMUSG00000056185
Ovol1	ENSMUSG00000024922
Rnaseh2c	ENSMUSG00000024925
Kat5	ENSMUSG00000024926
Rela	ENSMUSG00000024927
Pcnxl3	ENSMUSG00000054874
Map3k11	ENSMUSG00000004054
Ehbp1l1	ENSMUSG00000024937
Fam89b	ENSMUSG00000024939
Scyl1	ENSMUSG00000024941
Dpf2	ENSMUSG00000024826
Pola2	ENSMUSG00000024833
Arl2	ENSMUSG00000024944

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr19:5388288-5388299	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr19:5388288-5388298	GCCCCGCCCC	+	6.02
NFYA	MA0060.3	chr19:5387754-5387765	GGCCAATCAGA	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12324

chr19:5388095-5391637

Spleen

Enhancer Sequence

CCAGGCCCTA CCAGGAGGGC ATCTTCTCAA AAATCTCTGC CGTATTCAAC CACTGCAGTC 60
ACTCTCTTCT TTAACCCAAC AGTCCCTTTC TCTGCCTTGG CACCACTCCA CTTTCTGTGG 120
GAACTGTCAA GTCCCAAGTC TCCCTTTTTC CAACTAGCAG ATTACTTTCA AGAAAATTTC 180
TGATCTGGAG ACTGGAGAGA TGTCTCAGGG GATAAGAGCA CTTGCTGTTC TTACAGAGGA 240
CCCAAATTTG GTTCTCAGAA TCCATATGGC AACTCACAGC CATCTAATTC AGTTCCAGGG 300
GATCCGATGC CTTCTTCTGA CCTCTGCTGG CACGGGCACA TGAGGGTAAA ATACTCAAAT 360
GCATTAACAT AAAAACAATC CTTTGTTTAA AAGATTAATG TCCTGTGGTG GATCACACTT 420
CAGCAATGCT CTCTTTGCAT AGATCCTATG GGCAGACTGT GGGTTCCTGC CACTGGCTAC 480
TATTTATGCT CCTCAACATG TTCCTCTGCC CACAACTGAA CTACTGGAAT TTAGCAGGTT 540
CTATGCCTGA CTCTCGTTCT CATTCCACAT GTTCTAAGGC ACTTCTTTGG TTTCCTGAAT 600
ACACACCAGC CCAAAGTCAC TCTATCTCAC TTAAACTGTA AGGTTTCCCA TATACACCAA 660
ACATAAAGTT CTCCCAAAAC TGTGTCATTC TCCCCTGCCT CAAATCTGCT TCTCTTCTAA 720
ACTCAGTTCC AACAGATGAC ACCTCCATTC ACCAGGCCAA TCAGACCGAA TTCCTATTCA 780
ATCTGTCCAC TTCTCTCCGG CCCGCTGCAT AGAGAAACAT GCATACTATT AGCCCTCACC 840
TGGTTGCTTG GACCTCCCTC CCGATCTCTT GATCTCTGGT CCTACGTTTG ACAAGCTCTC 900
AACCCACTGA TCTTCATAAA ATATCATGCA ATTCAAGTCA CTTGCTTACT CAAATCCTTG 960
GCTCCCTACC ATCCTCATAA CAAAGCCCAA ACTTCTCAAC AGGGCTTACA GCGCTGGTTC 1020
AGACCCAAGC CTATCTTACT GCTTCATGTC TCCGCTATGA GCTATTGGTC GATTGTCTGT 1080
ACACGCTCGT CCCACCTCAT TCACCCACCC AATGCATTGC TGTGAAGTGC CAGGAAGACA 1140
GGGAAGGCAG GAAGACTCCT GTCTTCTTAA AGCTTAACGT GGAGACGTCA ACGTTTAACC 1200
CCAAACACCC GGAGGACGTC TTTAACCCGA GAGGCAGATG GCCCTCGAGG TCCTCCCGTA 1260
CCCTCCGTCC TGGGCATCCC AAGACCCTGC CCCGCCCCCG GGCCCCGCCC 1310