EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-10593

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr17:28290620-28292000

Target genes

Number: 19
Name	Ensembl ID

Nudt3	ENSMUSG00000024213
Spdef	ENSMUSG00000024215
D17Wsu92e	ENSMUSG00000056692
Snrpc	ENSMUSG00000024217
Gm15598	ENSMUSG00000086149
4930526A20Rik	ENSMUSG00000085521
Tcp11	ENSMUSG00000062859
Scube3	ENSMUSG00000038677
Zfp523	ENSMUSG00000024220
Def6	ENSMUSG00000002257
Ppard	ENSMUSG00000002250
Fance	ENSMUSG00000007570
Rpl10a	ENSMUSG00000037805
Tead3	ENSMUSG00000002249
Tulp1	ENSMUSG00000037446
Fkbp5	ENSMUSG00000024222
Clps	ENSMUSG00000024225
Srpk1	ENSMUSG00000004865
Mapk14	ENSMUSG00000053436

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MAFF	MA0495.3	chr17:28291454-28291469	TCGATGAGTCAGCAA	+	6.04
MAFF	MA0495.3	chr17:28291454-28291469	TCGATGAGTCAGCAA	-	6.07
NFE2L1	MA0089.2	chr17:28291455-28291470	CGATGAGTCAGCAAA	+	6.43
NFKB1	MA0105.4	chr17:28291284-28291297	CGGGGAATCACCT	+	6.11
Nr2f6(var.2)	MA0728.1	chr17:28291008-28291023	TGAACTCTGGACCTT	-	6.32

Enhancer Sequence

ACTGTCTGGG TGAGCGAGAG AGCCAGGGCT GGTGGCCCGG GACTGGTTGG GGAAGGAGCT 60
GCTCTCAGTG TGTCTTGGCC AAGCAGGAAG AAAGTGGTCA AAAAGAGTTC CAGGCTTTTA 120
AAAGCAAGGA TGGGGTAGGG CACTGCTAAT GTGTATTGCG TGCGTGCGTG CGTGCGTGCG 180
TGCGTGTGTG TGTGTGTGTG TGCAGGCACG AGCGCGCACG GAATGGGGGT GGGTTGACAT 240
TAGGACCCTT CTTCTAAAGT CTTTTTTTTT TTTAAAGATT TATTTATTTA TTATATGTAA 300
GTACACTGTA GCTGTCTTCA GATACACCAG AAGAGGGAGT CAGATCTCGT TACGGATGGT 360
TGTGAGCCAC CATGTGGTTG CTGGGATTTG AACTCTGGAC CTTCGGAAGA GCAGTCGGGT 420
GCTCTAACCC ACTGAGCCAT CTCACCAGCC CCTCTTCTAA AGTCTTAAAG TGTGTGAGCT 480
CCTTAGGAGC AGGTGTGTAG AAAGCACTGT GCAGCTGTAG CACAGGGCAG GTGCTGAGGC 540
AGGAGCACTG TTGCTAATGC AGTTGGATGC TCTCTGAGCC CTGGATGCCT CTGCCCCTTG 600
TCTCCCGCCT CCCTTCCTGT CTTAAGACTC ATCCTCTCCA GTTCAGAGCC TTCTTGGTCT 660
GGCCCGGGGA ATCACCTGTC CCCAGAACTC TATCTGGGGT AGAATCACTG ACCTCAGCTT 720
TAGCCAGTCA TCTTGGAGTT ACTCGGACCC TGTCAGAGTT TCCTCTACGT AGGAACTCTG 780
AAGCTTCTAA CAGGATTTGA AATTTGAGAC TGGGGTCCTC TCTCAAACGT CTGTTCGATG 840
AGTCAGCAAA GGGAAGAACA GCAATGGAAT GGCAATGGCT GGAACATGGT AGCTCAGATG 900
CTCTGTGACC TAGGAACCCC CTTACTGCAT AGCTGCCATG TGGTCATCTT CTACCCAGGT 960
CCCTGGCAGG CCCTTCTCCG GGGCTCCCCT CCCCCGCCCT TCTGCTACTA TGAAAGAGCT 1020
GTCTCTCCCC TGTCACCAAA GGACTATTTA GGGACAAGAT CTGAAGTACT CGGTACAGGG 1080
TAGGGGTGCC CACATGACCG TGAATACCAT CTTTGATTCT TTGGTCTCCA TTGGGTCCTA 1140
ACCCCAACTA TCACCAACCA ACCATAGAGA CAAGGGAAAG AACAGGTACT GGGAGGGTCT 1200
GAGTTACAAA GGTCTGGTGA AGGTGAGTGT TCACAGCCTC AACCATCCCT CTAACCTTTG 1260
AGAAAACTCC AAGAACACGC ATGGGTCTCA GTTTCTCCAG GGAGAAGTAG AGGGTGGGAG 1320
GGATGCAGCC AGGATGGAGA TGGAGTCCAG ATGTCCAAGT GATGAATTTG GCTGTAGTGG 1380