EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-05898

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr12:101525000-101528430

Target genes

Number: 5
Name	Ensembl ID

Psmc1	ENSMUSG00000021178
BC002230	ENSMUSG00000021179
Gm10433	ENSMUSG00000072884
Calm1	ENSMUSG00000001175
Gm17302	ENSMUSG00000091093

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr12:101526165-101526176	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr12:101526165-101526176	AGAGATAAGAA	-	6.32
HNF4G	MA0484.1	chr12:101527664-101527679	TGGACTTTGAACTCT	-	8.73
Hnf4a	MA0114.3	chr12:101527662-101527678	ACTGGACTTTGAACTC	-	7.36
Myod1	MA0499.1	chr12:101527296-101527309	AGCAGCTGCCCCC	+	6.03
Nr2f6(var.2)	MA0728.1	chr12:101526374-101526389	GGGGTCAGAAGGTCA	+	6.73
RARA	MA0729.1	chr12:101526374-101526392	GGGGTCAGAAGGTCACTT	+	7.13
RREB1	MA0073.1	chr12:101528143-101528163	TGGGGGGGGGGGTGTTGTGG	-	6.71
RREB1	MA0073.1	chr12:101528145-101528165	GGGGGGGGGGTGTTGTGGGT	-	8.4
Rarb	MA0857.1	chr12:101526373-101526389	TGGGGTCAGAAGGTCA	+	6.39
ZNF740	MA0753.2	chr12:101528142-101528155	ATGGGGGGGGGGG	-	6.07

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_03996	chr12:101527874-101528608	Cortex
mSE_07443	chr12:101525446-101528892	Intestine
mSE_10911	chr12:101526920-101528085	Olfactory_bulb

Enhancer Sequence

TGTCCATGCA GGGACCCAAG GAGCTCCAGG CATTCACAGA GCTAGGGACC CCAAATTTGT 60
ATATCTCAGA AGGGCTACGT GCAGAACTCA GAGCTTGGGT ACTGGCAGAC CCCAGTGAGC 120
TTTCTAACCA AACCAGAGAA GGGACACAAT TGTTCACCAC GGAAAGGTTG TCACTGTTTC 180
CCGGGGAGGA GATGCTGAAC CCAAACAAGT GAGCTTCATG CTCAGGGCCA GCCAAGTTGC 240
CTCTACTCTG CCTTTGGTAA CTGAACAATA TGATGTTAGA ATTTCCATTC TAGAAGGAAT 300
GGGCTTAGGC TGTATTCAAG AAATCAGCTT CCTAAATGAC TTCCTGCTGA TCTGCCCCAT 360
GAGGGGCTCC TATTGCCCTG TGAGATCCCA GGAATGAGGC CCATGCTCTG CCTACTGTCT 420
CTGGGAGGGG ACTGGGGCTG TTCTATGGCA GTACATTCAT CCACAGCATA CGCAGAAAGC 480
TGGCTCGTGA GGGTCACAGA AGAGGACAAT TGGGAACGCA GCCACTAGGT GTGTCACAGC 540
ACCACCAAGG GTGCTGTAGC ACTAGTTGTT TAGGCCTGGG GGACAGTGAC AGTGTGACCA 600
ACATGGGTAC AGACCAGGAG AGTAGCCCTC CTTTTGCTTC AAGATAGCGT TTTCAACTTT 660
GGAGGCCCAG CTGCACTGGA ATCTCAGATC TCTCCCACCT CCTCAGGGAG TTCGCACCCC 720
TCCCCTCTTC TTTGTCCACT GCCTTCAGAC TACCTCTTGG AGGAGGGACA GAGGATGGCA 780
CACTGGAGCA CAAGTAGTAG ACATTTTGGT ACCCTCTGCT TTCCACCCCC TAGCCTGCAA 840
ACTTGGATTT GCTCAAGGCG GTGAGAAACA ATTTGTCCCC ACCATGACCA CTCTTTGGCC 900
AGATTCTCTG TTTGTCAGAC TCCTTTGCAG CTAGCAGAAG CCATTGGCAC AACACCAGGC 960
AATGACATAT AAGGGAAGGT CTCTGGGAAG ACTTCCAGTC CAGAAGGAGG GAGGTTCTGC 1020
TTCTCCATGA AGGAGTGTGT GGCAAGAGGG TTTTCTTAAG TTGCCATACT CTTTGTTTAT 1080
GACGGATTAC AGACATAATG TCTGGTGTGA CAGCAGTCAC CCTACAACCA TGTGGCTCCA 1140
GCTTAACCCT GAAGATGATG GGCACAGAGA TAAGAACCAA ATGATCCTGA GGCCACCTAC 1200
TTGTGGTTCA GTTGGAGTCT CTTACTTGCA CACCAGAGAA GCACTGGAAT CTGGGTGCGC 1260
ACAGTGGGTC CTCAGGAAAT AGTGGCTGCT GCCACTACGA TGTGTGTGCA AGTTGCTTAC 1320
TCAAGTGAGT GCACGTGGAT GATGGATCTG TGGCTTACAC ACACAAGGAC CTCTGGGGTC 1380
AGAAGGTCAC TTAAGTCCAG GAAGTGTCAC TTGGCTCAGG CAAGCGGACC ACTCCCTTTG 1440
GCTTGCTGAG AGGCAGCTTC CTTGACTGTA TGCTGAGAAT GAGGGCAAAG TTTCTAGTTA 1500
GCACTCTGGG CCTCACACCT CAGAGACAGA GGTGAAACAC TGGCCCCATC TGGGGAAACT 1560
GAGACTCAAA GGGGCCCATG GAAATGCCAA AGCTGAAAGC CGGGAATGGT GGACCATGTG 1620
ACCTCACGCA GACTCTATAT GTGGGAGGAC TGTGTGTGTG CAGAGTTGAG TGTGTGATTG 1680
TATAAGGGCA TGTGGTCAAG GATGCGTGTG TGTGCAAGTG TGTTTGTGTG TGTGTGTGCA 1740
AAGGTGCACA TATAGGGCTG TGTATGCAGA GGTATGTGTG CAGGGTTTTA TATATGTGTG 1800
TATAGACTGT GCATACATGC AAGGGGCCTG TGTATACATA GAGATATGTG TGTACATAGG 1860
TAAGTGTGTG TATGTGCATT TATATACAGG AACATACAGG AGTATATATG TAGGATCTGT 1920
ATATGGGGTG CGTGCATGTG TGCAAGTGCA TGTGTGCAAT CATGTGTGTA TGTGTGAGCG 1980
TGAGCAAGGG TGCACCTTAA GTGTGTTTAC ATGTGTAGGG TGCATGCATG AAGTCACTCC 2040
TCTAGTATGG AGACAAACCC TAGAGATCTA GAGACTTCTG CTTTGAGGGT GTCTGTCCTC 2100
AGCCCTAGTA GAGTGGAGGC ACCTTGTGCA TCCTAGGCTC CCAGACTCCT GGCTCCACAG 2160
GGCACCCCTG TGCACCTCTG ACTCCTCAGA GACCAGCACT CCCCAGGTCT GCATGCTCCC 2220
TGAGGCTGCC TCCTGCTCTC TTCAAAACAC TACCACCAGC AGCAGCAGCA GCAGCAGCAG 2280
CAGCAGCAAC ACTGGCAGCA GCTGCCCCCT CTTTCTGGGC CAGCCTGGGC CTGACCTGTC 2340
CAGCTGCTAA GGCTACCTTT AGTGGATGTG TTTTCTGGGA ACCAGACTTC TCCTCCCAGC 2400
ATCTTCCAGG CTGAGTAGCT GGTCTAGAGG CGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 2460
TGTGTGCTGC TCCTCAGAAA GCTTTCCTGA GGTCTGTCAA TCAATACCCA TCAAACCATG 2520
CGGCATCCTC TAGGTTTCAC CAGCTGGGCT CATCTGAGGA GTTGGGCTGG GACCTGCAAA 2580
GCAGGAAGGC AGGTGAAGGA AGTTCCAGGC TCCTAGAATC CCCTCCTCAC AGAGCCTCCT 2640
GGCTTCCCAG AGGACAGGAT CCACTGGACT TTGAACTCTG GCACATTGGT TGTCCTGTGC 2700
TGGCCAGCTC TGGGAAAGCC TCCTAGTCTT ACCCCGCAGG AGGTCTAGTT TTTTGTCTTT 2760
TTGTTGTTGT TGTTGTTTAA CCTCATCCTC AGATCCATCT TTCACCTGTA GTGTGAGGGA 2820
GCTCTGACTC TGGGGTCACC AGTCTTCCAG CTACCGGTCC CCCTCACCTT CACAAAAACT 2880
CATCTGCCCC CCTCCCACCC AGAAAACTCA CCGCCTTGTC CTAGTATCCT CCTTACAGGG 2940
AAGCTTTGAT CCAGCCTGGG CCCTGCGCCA AAAAGTCATT AAAACAAAGA GCAGCCAAGA 3000
AGAGGGGAAA ATATCCCTTC TGGCTGGAGA AAGCCAAACA CTGTAACACT CCAGGCTCAA 3060
GCTCTCCCGG GAGCGGGAGC AGAGCTGAGG GCTCAGGGAG GGTGGGAGTG GGGGCAGGGT 3120
ACATACAGTG GGAGCTAAAG CAATGGGGGG GGGGGTGTTG TGGGTGGCTC CAAGGCTGAC 3180
AGGCAGAGTG CAGAGCCTGA TTTATGTCTG CTGTGGCCTG GAGAAACACC CTGCCCCTTG 3240
GGGGACCATA ACCTTGCTGG GTTGGGCACT ACAGGGGCTG GCATGGAGTC CCTGGTTCCT 3300
GATGTGTCCT GTAGCTAACA GACATTGGGG AGGGAACACT ATTGGGGCCA CGTGTGTGTT 3360
GTAGCTGGCA TGAGACTAAC AGAGAAACCG AGGTACCATT GGCTCTTCCT GAGTTCTCTG 3420
TACCTGTCTT 3430