EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-05662

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr12:77892400-77893320

Target genes

Number: 8
Name	Ensembl ID

Gm10451	ENSMUSG00000073000
Plekhg3	ENSMUSG00000052609
Spnb1	ENSMUSG00000021061
Churc1	ENSMUSG00000090258
Fntb	ENSMUSG00000033373
Gpx2	ENSMUSG00000042808
Rab15	ENSMUSG00000021062
Max	ENSMUSG00000059436

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr12:77893237-77893252	TGACCTCTGACCTCC	-	8.03
Nr2f6	MA0677.1	chr12:77893237-77893251	TGACCTCTGACCTC	-	7.42
RXRB	MA0855.1	chr12:77893237-77893251	TGACCTCTGACCTC	-	6.84
RXRG	MA0856.1	chr12:77893237-77893251	TGACCTCTGACCTC	-	6.91
Rxra	MA0512.2	chr12:77893237-77893251	TGACCTCTGACCTC	-	6.88

Enhancer Sequence

CCTACCTTCG CAGAAGACAT TAACTCAGTC ATTCATTCAC GCCTCCATTT GCCTCGTGCC 60
TGGCTTTGTG AGTGTGTGAG CTTGAATAGA ACACAGGTAG AACATGAGTG TCCATTATAA 120
GCCTGATGAC CTGATTTCAA TCTCTGGCAT TCCCATGACG GAGGGAGGCT TTGCGAGTTG 180
TTCTCTGACT TCCACATGCC ACATCCCATA TACATACGTG TATGTGAACA CGCACGTGCG 240
TGTACACGCT ATAATTTTAG AAATTTAAAT TTTAAGTAAT CAAAAGAAGG ATAAAGTACT 300
TTTGTGTTCC TGGTAACTGC AATTTCTACA CCCTTGCTGT TGGTAAAAGT TGTCAGTTAA 360
GGTTTAATTA GTCCAGGACC CACAATGATG AGCTGTCTTC TTGACTGCTG ACTGTAGTCT 420
AACAGCCTCC TAATACACTC AGCCAAAGGG GCCCTGCTGT CTTTTCCTTC TCTTTATTTC 480
ACTTTATCAC CACCTCTTTT TGCTGATTCT AAAAGAGCCA TGAAATAATT CACATTTACA 540
ACAACTCCAA CTGTCACTAC AGACCTTGAC CACAACCTAA TCCATATAGT AACTGGAGTA 600
TCCCCTTGGC CAGAGCTACA CCCTCCCAAA CTTCAGTGTG TTTCCAGCCC CTCCATCCCA 660
CCACAGTTCT GACCACCCCT CCACCTCTGT CCAGAAAGAA GACATGGGGC CAACAGGATG 720
GCTCAATGAG GCATGGGGCT CAGCAGGATG GCTCAGTGAG GCATGGGGCC AGCAGGATGG 780
CTCAGTGAGA CAAGCCCAGT GACCTGAGTT CCAGCCCTGG AAGCAATTCC CCAAAGTTGA 840
CCTCTGACCT CCACCCATGT GCACACTTAT ACACAGAATG AAACACTTGA AAATTTTAGA 900
AAGGAAGACA GAGACCCAGG 920