EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-03564

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr11:58751190-58751890

Target genes

Number: 14
Name	Ensembl ID

Fam183b	ENSMUSG00000049154
Gm12258	ENSMUSG00000068869
2810021J22Rik	ENSMUSG00000020491
Gm12256	ENSMUSG00000087654
Zfp39	ENSMUSG00000037001
Rnf187	ENSMUSG00000020496
Hist3h2ba	ENSMUSG00000056895
Hist3h2bb	ENSMUSG00000080712
Hist3h2a	ENSMUSG00000078851
Trim17	ENSMUSG00000036964
2310058D17Rik	ENSMUSG00000085379
Trim11	ENSMUSG00000020455
Guk1	ENSMUSG00000020444
Arf1	ENSMUSG00000048076

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr11:58751485-58751500	GATGGGCGGGGCTTG	-	6.34
SP2	MA0516.2	chr11:58751484-58751501	GGATGGGCGGGGCTTGC	-	6.36
SP4	MA0685.1	chr11:58751483-58751500	TGGATGGGCGGGGCTTG	-	6.24

Enhancer Sequence

CCTCAAACAC GCTAAGCTAC GATTTTCTCT CCTGTCGGGC GGAGACCACG GCTTTCCTAC 60
CTGGCTATTC AGACATCTCT CTCTGGGTCA GGGATGATAC TCTATCTAGA TCCCTGCAAC 120
CCATCTTCAC ACAGAGTCTA ATAGTCGGTT TCTGCCCGGT GGCAGGTGCT ACGTGCAATG 180
ACCAAGAGAG TATAGCAGAG AAGGTTCCTG AATGAGGTGG ACCGACAGCC CCTCAGAGGG 240
CTGCAAATGG TAACTGGTAG ACCAAAGACC ACTCTCAGGT CTCCATAAGC AAGTGGATGG 300
GCGGGGCTTG CACCGATGAA ATCACACCGG GATAGGAGCA AGAGGCCTTG AGGAATGGGA 360
TCGGGACTTG AGGGGAATTC GAGAAAAATA GAAGTCTTAA GGTTGTATAG AGATAAGGCA 420
CAGCTAGGCC AGAGACCTGG GATGAAAGGG GGACGGAGGA GCATGCGCTA GAGATAATAG 480
CTCGAGGGAC ATAGCAGGGT CCGGGAGACA GATAATAGAG ATGAAGGAAG GCAGAATCAC 540
GGACTCCAGG ATCCAAGAGC CCCTAGCATG GCAGGGTCCC CGGGGAAGGG AGGGTGCTGG 600
GCACCCATGG GATGCGGGAG AGGGAAGAGG AGGTCAGCAC ACTGATCGAA TGCCTGACTC 660
CAGGTAAGCC ACAAAGGTGG ACAGTGTGCA GGGGCCCCTC 700