EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-01594

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:194637000-194640000

Target genes

Number: 4
Name	Ensembl ID

Hhat	ENSMUSG00000037375
Gm15867	ENSMUSG00000089812
Sertad4	ENSMUSG00000016262
Irf6	ENSMUSG00000026638

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr1:194637673-194637689	TGCTAAGTAAACATTG	+	6.15
FOXC1	MA0032.2	chr1:194637676-194637687	TAAGTAAACAT	+	6.02
FOXD2	MA0847.2	chr1:194637674-194637687	GCTAAGTAAACAT	+	6.92
Foxa2	MA0047.2	chr1:194637674-194637686	GCTAAGTAAACA	-	6.52
Gfi1b	MA0483.1	chr1:194639465-194639476	TGCTGTGATTT	-	6.62
KLF14	MA0740.1	chr1:194639715-194639729	TAGTGGGCGTGGTC	-	6.54
Klf12	MA0742.1	chr1:194639714-194639729	ATAGTGGGCGTGGTC	-	6.7
MEOX2	MA0706.1	chr1:194639183-194639193	AGTAATTAAC	+	6.02
Nkx3-2	MA0122.3	chr1:194639929-194639942	ATTAAGTGGTTGT	-	6.32
SP1	MA0079.4	chr1:194639716-194639731	AGTGGGCGTGGTCTA	-	7.1
SP3	MA0746.2	chr1:194639716-194639729	AGTGGGCGTGGTC	-	6.32
SP4	MA0685.1	chr1:194639714-194639731	ATAGTGGGCGTGGTCTA	-	6.8
SP8	MA0747.1	chr1:194639716-194639728	AGTGGGCGTGGT	-	6.74
ZNF263	MA0528.1	chr1:194638897-194638918	TCCCTCCCTCCATCCTTCTCC	-	6.53

Enhancer Sequence

TTTACTTTGA CTCACAGCCA TCTGCTAACT ATAGCTCTAG GGGAATCCAG TGCCTTCTCC 60
TGGTCTCTGA GAGCACTGCA CACACATGGT ACACAGAAAC ACACACAGTC AAAACACCCA 120
TACACATAAA ATAAAATGAT AAAAAAAAAT TTAAGTCCAT ATGACCAGGT CCCTGTCTGT 180
GGCCAAGGCT CTAACTACAT TCAAGAGTCA GGAATCTGCC AGAACCAGAG CCATACCTCT 240
GTGTATCCAT AAGGCTGCTA CCAAGCCCTG GAAAGCAGTG TAGAAAGTGC CACACTTGCA 300
TAATCTCACC AGCATCTGGC AACAGAGATG GCTCCAGGTG AGATAGGTCC TGAGGCTGGC 360
TAGGCCAAGC CAGTCACTCT GTTCTCTAGT GGGCGTTCTA GAGCAGAAGC ATGCGTAGCC 420
TTCAGTCTCC TCAGTGACTT TAAGGGCTTT TCTGATCTCA CTCACCTAGG CAGTATTTCC 480
ACAGTTAAGG TCCATATCAG AACACATGGG CTGGACTTCT TCTCATGGAC TTCCTCTCAT 540
CTCTCTGCAC ACCAGATTCT TCACTCAAAT ACAGAGGGAA TAAAACTACT CATCTCAAAG 600
GCTATCGGAG GGTTAAAATG AGATATATTA GATTACACAC ACATTAATGT AAATTATCTC 660
ACAGCAATGT TAGTGCTAAG TAAACATTGT CAACTTCCGT TGTTCTGATG TGACTAATCC 720
TTTTCAGAAG TCGGGGACTG CAGACTATCT AGAATCAGGC CATGATGGAC ACCTGACTCA 780
GGGCAGGAAG AAGATCAGAT GAAGAAATGA CAGACAAGTA ACTGGCAAAT ACCAGGGGTG 840
AAACGGAGCC TAGATGAGAG CAGACGCCAC CAGGCATATA AAGAAACATG CCTGGGGCCA 900
ACATGAGTTA GAACAAATCT AGCTGTCATA CCAAAGGCCC AAACAACGGT GTCTCTGCTG 960
CCATTGGTCC AGGGTCTGTG GTGGATCTAT GATGGAGATC CAGGTTTCTC CTTCCTTGTA 1020
ACTATCTCGT CTAAGATGAC CACTCCAGCT TTAGCCAAAG CTTCAGTCTT CTAGTCTGTC 1080
AGTAGCTATC ACATGCTTTT CCTAAAGACA CCACTAAGGA GCCAGGGGAT CACTTCTGCT 1140
CATGTCTCAT GGGACGCACT CAGATACTGA GCTGCAACAG AGAGAGAGAT GAATGTGGTT 1200
CTTAGCTGAG CAGTCAAAAG TCCAGGGTGG ACACTGGGGC AAAGGACTGT GTCTACACAG 1260
GGTTAGTGTG TGCTTATGGA TTCAATGGAA CTTTCATTTC TCATGACCTT CAAATAAACC 1320
TGGCAATCCC ATATTGTCTG TGATCACTGT ACAAAGATGT GGGTGCTGGA ACCTTCCTAC 1380
AATAATTCAC TACTGCCAAA CAACACAGCT TTATCACCAT TGGTGGGAAA ATGACTCCAG 1440
TTGTCCAATT CTGCTCCAGG AAAATATCTT GGAGTCTGAT TAAGTCACAC AGACATTAAA 1500
CAAACTTCCT TCTCTTGATC AATTCTGTTA CCGTTGAGGT TTGCTAAGCC AGCTAACCTC 1560
TTCTGAGAAC CGGATTTAAA AAGACCAAAC ATGCCAAGTT TTTTGAACTT TGACAAAAAT 1620
ACTCTGTAGA ATTATTGCTG GATTCAGAGC TAGGCCCTGA GAGACACTGA GCTGATGAAG 1680
GGATGGGAGC AGAGCCAGAA GTTAATGCTG CTTTCCATAG CTGAGGGAGG CCCATGTCAC 1740
TCCAGGCTCC CTCACACCCA CTTCGTCCTC CTGCAGAGTA ACTACCAAGA CCTGTGCTTG 1800
CATACAGTGA AATGGTGAAC GTCATCTCAA AAGGATCTGA GATGCACATA GGCCATAGGC 1860
CATAGGCCAG AGATCCGCTC TGGGAAGCAA GGGTGCATCC CTCCCTCCAT CCTTCTCCTC 1920
TTAGGGATAA GTGTCTAAGC AAAAGGCAGC ACGTGTGTCC TGAAGAGTCA AGTCATCTGG 1980
TCTTGCAATT GCCTAGTCAT GAAAATGAGA AAGGAGACAG AAGATAGCAT CAAAGATCTG 2040
GCTCTCAGCC TGCATCTTTT TGCCTCAACA TGAGGTTGGC AACCAATTTT TACTTTTAAT 2100
TTCCCAGTAT TGTGTCATTT CCTATAACTG ATGTGTTTGT AGACTTTAGA CTTCGACACC 2160
ATGTCGTACT TTGTACCCTG GTTAGTAATT AACAGTTTAC ACTATAAAAC TATGCCTTTG 2220
AGCGGGAAGC ACAATCATGT TCGTTGTTTT TGTAGTCATG TTGTTTTTCT ATTCTATCGT 2280
GGTGAAGCTT CCTGCGGATT TTGCCCATTG CTTTGCTCGA GAGTCCCAAA CAATGGATGG 2340
ACAACGCCAT CGAGGCAAAC TGTTGGTTGC CCGATGATGG CGACATGAAC TTAAACTGAA 2400
TTGACTTACC TTATGTCAAA ATTGCTGACC GGCTTTTGAA TGAATTAAAA GCTAGAGTGG 2460
TTTTATGCTG TGATTTTTTC AACTGGAGAA AGGGTCGGAG GACCACCTCA TTCACATTCT 2520
ATTGGACAGC AATACCTTAA GCTCTTTTGT CTGGGACGCT TCATTCTTTC TCTGAAAGAG 2580
CACATCGTGG ACAAAGTGTA AGAGGGAATC GATCCTTGCG TGGAGCAGTT GCACGTCAAA 2640
AAGACGGAAG GAGCGAACAA GACAATCCAT TGGATGTTCA TCAATTACCT GATTCCCAAG 2700
ACCCAATCAG AATTATAGTG GGCGTGGTCT AATATCAAAG CCTATAAAGA GGCGCTGCAG 2760
GCTCTGTAGA AGCACAAAAA AGCTCTTTGA ACAACACCAG CAGGAGGCTG TCATTGCCAA 2820
GAAAGAGAAA GAAGAGAGTG GAAAGAACTT CAAATTTCAA CTCTTTCAGA GTTATGAGGA 2880
GACCACAGCC ACACAACAGA GTTGTTTTGA GGAAAATGGA CTCCAGAGTA TTAAGTGGTT 2940
GTAACAGTAA TAGCACACTG GTGGCTTTTA TCATTGTTGT CGTCGTCGTC ATCGTCGTCG 3000