EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-01398

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:174219540-174220380

Target genes

Number: 19
Name	Ensembl ID

Vangl2	ENSMUSG00000026556
Copa	ENSMUSG00000026553
Ncstn	ENSMUSG00000003458
Pex19	ENSMUSG00000003464
Dcaf8	ENSMUSG00000026554
Pea15a	ENSMUSG00000013698
Gm17224	ENSMUSG00000092085
Casq1	ENSMUSG00000007122
Igsf8	ENSMUSG00000038034
Atp1a2	ENSMUSG00000007097
Kcnj9	ENSMUSG00000038026
Kcnj10	ENSMUSG00000044708
Pigm	ENSMUSG00000050229
Slamf9	ENSMUSG00000026548
Igsf9	ENSMUSG00000037995
Tagln2	ENSMUSG00000026547
Ccdc19	ENSMUSG00000026546
Vsig8	ENSMUSG00000049598
Slamf8	ENSMUSG00000053318

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN	MA0488.1	chr1:174219907-174219920	ATTACATCATCTT	-	6.82
JUND(var.2)	MA0492.1	chr1:174219906-174219921	AATTACATCATCTTT	-	6.25

Enhancer Sequence

GTTATCCACC TGAGGAGGAA GGGGAGCCAT CATTAAACTG GCAGCAGCAG CAGCTCTGTG 60
GGCACACAGC TGTCTCCTGA GCCAGATTCA ACCCCCCTCA ATCTTCATGA CAAGAAGGAC 120
AAAATTACAC TTGCCCTCAT CACATATTTA TGGCCTTACT CAGCTATCAC CCTGACTTTG 180
GTTTGTATGA CTGAGTCTTC CTGACTTTTT TATGTCTTTG GGTTATTTAT GTAACCCACA 240
CGGCCTTTGT TTGTTCACCT GTAAAGTGGG AATGTTAGCA GGGTCATTGT GTTGCACAAC 300
TCCAGAGACA CCACCAAGAC TGTCTATAAA AATGCTACCT CCCAGGGTTA TCAGGCTGTG 360
ACAGATAATT ACATCATCTT TTTCCAGACA CCCTCTCTAG GTAGGCAGGA TGGGTGGACC 420
TTGAACTCTC TCCGTCTTCC TGCTTCCACC CTCCGCCTGT GGGGAGGTTA AGATTATAGG 480
TGTGACCCAC CACACCCAGC TTCTTCATCT TTCTTTCCTT AAACTTTAAT TTAGTAGGCA 540
GGGATCCCTG TAGCCCAGGC TGGCCTGGAA TCTTTCAGAG TGAAATTAGA TGGTGTATGT 600
AAAGACTTCT ATCATGGAAA TAGTATTCAA TATACAGTGG CTATAAAATG ACTAGATCAA 660
AGAAATCCCA GGGCACAGAG CATTCCTAAC AGGTAGAGCC ACAGAGGTAG CATGTAGCCA 720
TCATATGCTG GAAGGAGGTA TACCAGGTAC AGGGGAGACC TTAATGTTTG CATTTTTTTT 780
TTAACTTTTA AGCTTTCATG TGGGCCTCTC TTAACTGTAC AGATTCAGCC GTGACCTCCT 840