EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-01346

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:172812400-172815190

Target genes

Number: 19
Name	Ensembl ID

Olfml2b	ENSMUSG00000038463
Atf6	ENSMUSG00000026663
Gm9929	ENSMUSG00000053925
Dusp12	ENSMUSG00000026659
Fcrlb	ENSMUSG00000070524
Gm2962	ENSMUSG00000089838
Fcgr2b	ENSMUSG00000026656
Fcgr3	ENSMUSG00000059498
Sdhc	ENSMUSG00000058076
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ufc1	ENSMUSG00000062963
Nit1	ENSMUSG00000013997
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr1:172813876-172813891	AGGTCAGGCTGACTT	+	6.15
NRL	MA0842.2	chr1:172812418-172812431	AAATCTGCTGACT	+	6.14
PKNOX1	MA0782.1	chr1:172813212-172813224	TGACATCTGTCA	+	6.52
PKNOX1	MA0782.1	chr1:172813212-172813224	TGACATCTGTCA	-	6.74
PKNOX2	MA0783.1	chr1:172813212-172813224	TGACATCTGTCA	+	6.52
PKNOX2	MA0783.1	chr1:172813212-172813224	TGACATCTGTCA	-	6.62
REST	MA0138.2	chr1:172812595-172812616	TCCAGCACCGAGGAGAGAGGT	+	6.65
TGIF1	MA0796.1	chr1:172813212-172813224	TGACATCTGTCA	-	6.62
TGIF1	MA0796.1	chr1:172813212-172813224	TGACATCTGTCA	+	6.74
TGIF2	MA0797.1	chr1:172813212-172813224	TGACATCTGTCA	-	6.62
TGIF2	MA0797.1	chr1:172813212-172813224	TGACATCTGTCA	+	6.74
ZNF740	MA0753.2	chr1:172812574-172812587	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr1:172812575-172812588	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr1:172812571-172812584	CTACCCCCCCCCC	+	6.13

Enhancer Sequence

CCACCTACTG TTCCTCCCAA ATCTGCTGAC TTTCCCCACT ACCCCTGCTC CTAATGAAAA 60
GGGATCTATA ATTCTGAATC AGGTTGTGTT TTAACTTACT GTGGGTTTGT AGGAAAGAAC 120
ACCACAAAAA AGCCCTTCAG GTGAGCTTTG TTAGGCAAGA AAGCCCTGAG GCTACCCCCC 180
CCCCCCCCGA CATTTTCCAG CACCGAGGAG AGAGGTTAGC AGAAATCCCA TCATACCAGA 240
GGCAGAAGAT GCCAGCCTTG AAGGGAAAAA GTGGGCCTTC AAATCTGGGA AAGGAGAGTC 300
ATTCCACCAT ACATACACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC 360
ACACACACAC ACACGTGTAT AAAGAGAGAC ACACACACAT ATAATATATA TGTAATATGT 420
TATGTTATAT TATAATTCTA TTTAATATAT TTATAATTAT TTATACTATA TAACTATATA 480
CTACATAGAT ATGTTATATT TATATGACTA TATATATACG TATGGGTGTG AATGTATGTT 540
TATATGTTTC CAAAGAGAAA GAGACTTCAG TTCCAGGAGA CAAGTGGAAT TTCTGACTCT 600
TACTGTTTCC TTGGAGGGAG GCAAGCTCCA CAATAGGTGA CCTATCCAGG CTGGCCTCCA 660
AGCCAAGAGT CATAAGGCAG AAGTACACTA TATAAAAGTA GAGTTATAAA TCAATGTTAT 720
CTGGAGACTG GGGGCAAGGG GGTAGTGCTG ACCTAGTCAG GCTCACAGGT GCTGATGGGA 780
GAAAGAGGCC TGTAAGAGAG TAAGGTCACA ACTGACATCT GTCAACTTCC TGCCCCAGAG 840
AGCTGCAGGG GGCTGAGGGA TGACCTGATT TCTGGGAGAA AGAATCAGAG CCTGTGATCT 900
ATCAGGTTGG GCTTAGTAGC TAACCACACT TTTTGACCGT TCTGTGTACA TTTAAAAAAA 960
AAAAAATGTA GTGGCTACAG GACAAATCCA AGGTCCAAGG TCCTTTGCTC TTAACGTTGG 1020
AGTCTCTCCA GATCTCAGTA TTCGTGCTTT TGCTTCTCTC TCTCCCCACT CACCCTAGGG 1080
CAAGACAGAG AGGTTAGAAG ACCTCTTCTT CAATCCTAAG CACAAACTCC AGAAGTCGTA 1140
AGTAGCTTAT GTGTAATAAC ACCAGCACTA GGAGGCAGAT GCAGGAGGAC CGCAAGCTTA 1200
AGAGACTGTC TGGACTACAC AGCAAACCTT CCATCTCAAA AACAAAAACA ACAAAAATAT 1260
GGAGAGAAAA ATATCACTCT AACTTTCCTC CACCTTACTA AGAACCCGCC ACAAAGGCAT 1320
TCTCTTAAGA TTAGGGCTAT GCCGCCACAG TAACAGAATG TTTGCCTAAC ATGCTAGCAA 1380
GACAAATCAA TTCTCGGATC TATTTAGTCT GATATATCCT AAGACAATAA TTCCAGAAAG 1440
GGCTTTGCCT ATACACCAGA AGAAACAGCT CAATACAGGT CAGGCTGACT TTCCTGGCTC 1500
ATTCGCTAAG CATTATGTCA CACTCCTCTT GTCCAACCTC TTTTTTTTTT CTTTCTTTAT 1560
TTTTTATTTT ATTTCATTTT TGGTTTTTTG GTTTGTTTTT GTTTCCGAGG CAGGGTTTCT 1620
CTGTATAGCC CTGGCTGTCC TGGAACTCAC TTTGTAGACC AGGCTGGCCT CGAACTCAGA 1680
AGTCCGCCTG CCTCTGCCTC TGCCTCCCCA GTGCTGGGAT TAAAGGCGTG CGCCACCACC 1740
GCCCAGCCTC AATCACTTTT CTATACAACT GTCCAGTCTT AATTATTCCA AGAATGTGAA 1800
CCGTTTTTGT CTTAGTCAGG GTTTCTATTC CTGCACAAAC ATCATGACCA AGAAGCAAGT 1860
TGGGGAGGAA AGGGTTTATT CAGCTTACAC TTCCATGCTG CTGTTCATCA CCAAGGAAGT 1920
CGGGACTGGA ACCCAAGCAG GTCAGGAAGC AGGAGCTGAT GCAGAGGCCA TGGAGGGATG 1980
TTCCTTACTG GCTTGCTTTC CCTGGCTTGC TTTCTTATAG AACCCAAGAC TACCAGCCCA 2040
GGTGGGTGGG ACCTTGATCA CTAATTGAGA AAATGCCCCA CAGCTGGATC TCATGGAGGC 2100
ACTTCCCCAA CTGAAGCTCC TTTCTCTGTG ATAACTCCAG CCTGTATCAA GTTGACTCAC 2160
AAAACCAGTC AGTACAGTTT TCCTTTGGTC CGTGAATGTT TCTCTAAACT TGCCCGTCAC 2220
GTATAACTTT GATTAAAAAT CCTCCAGCAT GGTTTCACAC TCAAGGTGTG CAGCCCTCTG 2280
GACAGAAGCA GGTGGACATC TGTGCTTTTT GAAGCCAGCC TGCTCTACAT AGCGAGTTCC 2340
AGGCCTGCCA GATCTATACA GTAAGACCCA GTCTCAAAAA ACAAAAAGTC ACATGTTTTT 2400
CCCTTGTTAA TCACAGTGGC CTTTAGGGCG AGGAAGTATC ACGTATTTTC ACCCCAATAC 2460
ATCTGACCTG TATTACATTC GCCGGCTTGA GTGTCTGACT TCTCTTACAA ATCTGATAAA 2520
CTTTAACCTA ACCCCCAAAA TATAGACAAG CAGATAGAAC GATGGACGAA TGGACGGATA 2580
GATGGATGCA CAGACAGACA GACAGTTGCT GCAAGATGAA ATCAAACAAA ACACTAACCA 2640
AGGGCGGGTT TTGGAACCCT CATTGGAACC ACACACCCCA AGGGAAGATG AGGAACGAGG 2700
GTCTTGGCTC TGACAGCCTG GAACCTCCAC TTTTGGGCGC CTCTGCAGAG AGGCGAGACC 2760
CGGTGCAAGG CACCGCCCCC CTGCACGTGG 2790