EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00761

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:95977400-95979400

Target genes

Number: 7
Name	Ensembl ID

Atg4b	ENSMUSG00000026280
Thap4	ENSMUSG00000026279
D2hgdh	ENSMUSG00000073609
Gal3st2	ENSMUSG00000034005
Gm9994	ENSMUSG00000056307
Gm7889	ENSMUSG00000091067
Pdcd1	ENSMUSG00000026285

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr1:95978099-95978110	TTCAAGGTCAA	+	6.14
Nr5a2	MA0505.1	chr1:95978096-95978111	AGGTTCAAGGTCAAG	+	6.42
RARA(var.2)	MA0730.1	chr1:95978103-95978120	AGGTCAAGTCAATGTCA	+	6.13
Rarb(var.2)	MA0858.1	chr1:95978103-95978120	AGGTCAAGTCAATGTCA	+	6.24

Enhancer Sequence

TATAGTTAGC TTCCCGGCGA CCACAGGCAC CTTTAGGCTT TCACTTGCTC CAGGAATTGT 60
CCAAACCCTA CGGAAGACAG CTGGGCATTG TAGTTCAAAG TTTCCAGAAG GCGGTGCTTG 120
TGGACCCTAA CCATTCTGGG ATTGTAGTCT AAATTTCTGA CGTTGGCACC TGTGGAGAAA 180
CTTTTTTTGG GTTTATGGTC CATTATTTCT CCACGGTCAT CATCACGGAG GCTCCTGAGA 240
GCTTTTAAGG CTCTGTAGAT GGATGAATGG AGCCGACAGC CCCCGATCTC CGAGCCTTGA 300
AAGCAGAGTG CACTTGGGAA AGAACAAGCC TGTAGAGATT AGAGACAGTG CCCAGCGTCA 360
TTGGGCTTGG AGGATGGCCG GAAAGACCTA GCTGGGAGCA GCTTAGGGGC CTGTGGGCAA 420
AGCCTGTAAT TTTGGAGCCC CAAGGGCCAC GTGATGACAT AAGGCGCACT GGCAGGGGTC 480
CCTTGAACGG GAGGAGAGGC GGGGCTGATA GCATGAAGGC GGGAACATAG GATGGGCGGA 540
CCTCCACGCC TGGAGGCTGA GGCTAGGGCG GTAAGGTTTA CCAAAGCATG TCTTAAAGGA 600
TTCAGGATGC TATGGCTGAA AGTGAACTAG CTGCTGCATG ATACTACACC TGCAGGGTCA 660
GGGTCAGGGT CAGGGTTTGA CTGTTGCAAA TATGGCAGGT TCAAGGTCAA GTCAATGTCA 720
CAGTCGGAAT ATTCTGCGAT CTTAGCTGCC CCAGCTAGCA CAAAACATCG GTTGTCCACA 780
ACCCACACTA CTGTTCTCTG CACTGTGGGA AAACTGTTAA TTAAAGTCTA AGTCCACCTT 840
GACGGGATAG CCTTTGGACT AAGTGCAATA TGGGAGACTC TCTTCACTAG GGAATTTTCT 900
CCTTCTCTGA CCTTATCTGG GGAGTTCTAA GCCCCCCATA CACTCCTCTT CCTGAGGAAT 960
GTCACATAAC CTCAATTAGA TTATAGGACC AATCTACTTT CTTCCGACAA ACACTTGTTC 1020
AGCCAGCACC TGAGATTTCT GAAATGCTTC CTCATGCTAA CGAGGCACTC CAGGTGGCCT 1080
ACAGCCAATG ACCTTTGCCT ATCCTGGATA TCCCTGTCCT CAGTGCCCTC AAACTTTATG 1140
AGCCTTCAAT CACCCTGGGT GAAGTTCATC TGCCTTCGGG TCCTGGTGTG GTTTATTCGC 1200
CATATGTACT CACAGGGCTT CATTGAATCG ACCGACAATC CAGGAGAGCA GAGAGACCCA 1260
CACTGCTCTC TGTTCCTCTC TGCTCACCTC CACAGCTTCT TCAATTCTCC TCTGACTTCA 1320
AGGCCCACAG AGACCATGGG GTTCAGCCAT CACAAATGCA TTCCTCAGCT GTTTGTTCTT 1380
CGTGTCTTGT GTGTTAGTAT TTGTCCTCAC GTGGGAAAAA GGTCATTTGC TGATATAGTC 1440
ACATACTGGG GATCCTGGGT AGTGAAGAGC CCAGTAATTC CAGGCACTGG TCTGCTACCC 1500
CCATCTTACT GCATGCCCTT AAGCCCTGCA TTCTTGTCAG CTGCAATAAA TCCACCTGGC 1560
TGGCATGAGC CTCGTAAAGG CTGAGATAAG ACTACTGCCT AAGAATAGAC TTGAGTGGGC 1620
TAGAGAGTTG GCTCAGTGGT TAAGAGCACT GACTGCTCTT CCGATGGTCC TGAGTTCAAA 1680
TCCCAGCAAC CACATGGTGG CTCATAACCA TCTGTAATGA GATCTGATGC CCTCTTCTGG 1740
GGTATCTGAA GACAGCTACA GTGTACTCAC ATATATATAA CAAATAAATA AATCTTAAAA 1800
AAAAAAAAAA AGAGAATAGC CTTGAGCTTG CACCAACATC CTCTATCTGC CACACCCTGG 1860
GCTGCAGAAC TAACCCCCAA CTTACAAATT CCTTCTTTGC TATCCCCTGG GCATCTGCTT 1920
GTGGGTTTAT GCTTCAAGAG GAGGCTGCTC TCGACCTTTC AAGGTGGTTG TGTCAGCTCC 1980
TGAGACTGAG GCTACCCTGA 2000