EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00508

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:74949050-74949630

Target genes

Number: 25
Name	Ensembl ID

Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Ctdsp1	ENSMUSG00000026176
Mir26b	ENSMUSG00000065468
Vil1	ENSMUSG00000026175
Ttll4	ENSMUSG00000033257
Cyp27a1	ENSMUSG00000026170
Wnt6	ENSMUSG00000033227
Cdk5r2	ENSMUSG00000090071
Fev	ENSMUSG00000055197
Cryba2	ENSMUSG00000006546
Ihh	ENSMUSG00000006538
1810031K17Rik	ENSMUSG00000033159
Fam134a	ENSMUSG00000049339
Zfand2b	ENSMUSG00000026197
Abcb6	ENSMUSG00000026198
Atg9a	ENSMUSG00000033124
Glb1l	ENSMUSG00000026200
Stk16	ENSMUSG00000026201
Tuba4a	ENSMUSG00000026202
Dnajb2	ENSMUSG00000026203
Resp18	ENSMUSG00000033061
Dnpep	ENSMUSG00000026209
Des	ENSMUSG00000026208
Gmppa	ENSMUSG00000033021

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:74949208-74949229	GGGGGTGCGGGGGAAGGGGGA	+	6.04
ZNF740	MA0753.2	chr1:74949203-74949216	GTGGGGGGGGTGC	-	6.74

Enhancer Sequence

CTGGGAGGAG GGCATTGCTC TTGTTATCAA GGTTACAGAC CTGCAAGCCA CCTCTCACCT 60
AGCAGTGCTC GAGTGTGCTG TGCAGTGGGC TTTGCACAGA TTTCCCACGG AAAGCCCTGC 120
TTCTGGTGGC AACACTCGGC GGCAGGGGTG GCGGTGGGGG GGGTGCGGGG GAAGGGGGAG 180
GCACATCCCG TTGCAATTTC ACAGATGCTA GTTGTGTGGC TAAGTTCAAA CCTAGGTGAG 240
GTAGTTGCAA TCCCAGAGCT GGGTTTGGAG GATGGTAGGA GGAGAGGATG CACAAGAAGC 300
TATGTGGGGT CAAGGAATCC CAAAAGGACA GAATGCAACC CCACCCCACC TCGGCAAAGA 360
GGCCCCAGAA AACAGTGGTA TCAGAAGAAG TGGTACTTGT TCTCTGGTCC TAATTGTCCA 420
CTGGAGAGAC TTTGAACACA ACCACTCCAT GCCCGGTAGT GCTGGCTGGC AAACGCTATC 480
AATCAGGTAT CACACACTAC ACAAAGCTGG GTTCTGCTCT TCTGAAAATC CTCCCACCCG 540
AATCTTACAC TACACCAAGA GCTTGGGCCA GCCTCAGTGT 580