EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00491

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:74497120-74499260

Target genes

Number: 20
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Rufy4	ENSMUSG00000061815
Cxcr2	ENSMUSG00000026180
Arpc2	ENSMUSG00000006304
Gpbar1	ENSMUSG00000064272
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Gm216	ENSMUSG00000073650
Slc11a1	ENSMUSG00000026177
Ctdsp1	ENSMUSG00000026176
Mir26b	ENSMUSG00000065468
Vil1	ENSMUSG00000026175
Rqcd1	ENSMUSG00000026174
Usp37	ENSMUSG00000033364
Zfp142	ENSMUSG00000026135
Bcs1l	ENSMUSG00000026172
Rnf25	ENSMUSG00000026171
Ttll4	ENSMUSG00000033257
Cyp27a1	ENSMUSG00000026170

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr1:74497983-74497994	TTCAAGGTCAA	+	6.14
HNF1A	MA0046.2	chr1:74499179-74499194	AGTAAATGATTAACA	-	6.38
HNF1A	MA0046.2	chr1:74499179-74499194	AGTAAATGATTAACA	+	6.93
HNF1B	MA0153.2	chr1:74499180-74499193	GTAAATGATTAAC	-	6.39
HNF1B	MA0153.2	chr1:74499180-74499193	GTAAATGATTAAC	+	6.87
HNF4G	MA0484.1	chr1:74498280-74498295	TGGGGACAAAGTTCA	+	6.25
Hnf4a	MA0114.3	chr1:74498281-74498297	GGGGACAAAGTTCAGT	+	6.48
Nr5a2	MA0505.1	chr1:74497980-74497995	GGGTTCAAGGTCAAC	+	6.71
Nr5a2	MA0505.1	chr1:74498159-74498174	GAGTTCAAGGCCAGC	+	8.25

Enhancer Sequence

CCAAGCCTCC TACAGAGAGA AGAACAGGAA CAAGTGTTTA AAGAGGCACA GCACGCTGCT 60
CTGAGAGCAC TTGCTTGCCA TGCCTTCCCT AGCTTTACAG CTATCTGGAC TCTGACCTAT 120
GTGGAATAGA AGCTTGTTTC TTTTCAACAC TGTCCTCTTA AAACATAACG TTGGGGTTTT 180
TATTTCCTCT GGTCAATAAC ATTGTCAAGT CATTCAATGT GACTGTATGG CGTATTTTTT 240
TTTTTAAATA TAAAAAAATG CCAGGCACAG TGCTGCAGAA ATGGCTCAGC AGTTAAGAGC 300
ACTGACGTCT AGAGATCCTG AGTTCAATTC CCAGCACCCA CATGGTGGCT CACAACCCTC 360
GGAAATGGGA TCTCTTCTGG TCTGAAAACA GCAGCAGTGT AATCATTCAC ACCTAGCAAA 420
CTACTTACTT TCTTTTCCCT GGACTTAGCA TTTATCACCC TTTATGGTAC AGATGTAAAC 480
ACTGCTACAC TGCAGATTTC AGACAACCTA CAGTGAATAT ACTTATTCTT TTTCAATAAC 540
TACTTATAAG TAGTGTAGAA CACAACTGGC TCTCCTGAGC GGATGATGAA CACTTCCATC 600
CAGGAGACAC TCATACCCTG TGTGTGACAG CAGAATGAGC AGTATCCCTA CAGGTTACCG 660
AGCCATCTAT TTCTACTTTA TTCTAACTAA AGAAACCAGA TCCACAAGAC AGGTTTGGCA 720
GCAATACTAA ATGAAGACCC TTGACTGTCA TTTTTCTGAA ACAGCAAAGG TATTCTTAGG 780
AAAAAATATA AGTAGGCTGG GCAGTGGTAG CACACACCTT TAATCCCAAG CATTTGGGAG 840
GCGGAGGCAG GCAAATCTCT GGGTTCAAGG TCAACCTGGT CTACAGAGCA TGTTCTAGGA 900
CAGACAGGTC TACACAGAGA AACCCTGTCT CAAACAAAAC AAAATAAGAA AAAAAATGTA 960
AATAAAAATG TTTGAGCCGG GCAGTGGTGG TGTATGCCTT TAATCCTAGC ACTTGGGAGG 1020
CAGAGGCAGG AGGATTTCTG AGTTCAAGGC CAGCCTGGTC TACATAGTGA GTTCCAGGAC 1080
AGCTAGGGCT GTACAGAGAA ACCCTGTCTC GAAAAACCAA AAAACAGGAA AAAAATAAAA 1140
TGTTTAACTG CCTTTATGAC TGGGGACAAA GTTCAGTAGT AAAATCCTTG TATAAGGACC 1200
TGGGTCCCAT CTCCAGCGTC ACATACATGT ATCTTATTAC ACTGTAAGTA GAAAAGCACT 1260
GCTTATAAAT AAAAGGTTAG AAGAACCGAT TGAGATTGTA AAGGAGCTCT TCTCAATCTT 1320
AGTTGTTCAT TAGAATCACC AGGGAAGACT TTTAAAATCT AGATTAAAAG AAAGAGAAAT 1380
CCAGATGCCC AGTCCATATC CAAGGTTTAT CCTTTAAAGA TTTATCAGTA TTAGGACAAT 1440
TCAGGCATCA GTATTTTTGG AGCACCTCAG GTAACTTTAA AACATAATCA AGATTGAAAA 1500
GCACTGGTCT GCCAGGTGGC TGGGGTGCTC ACCTTTACCA CCAGCCCTGG GAGGCAGAGG 1560
CAGGCCAATC TCTCTGAGTT CAAAGGCAGC CTAGTCTACA GAGATAGTTC CAGGACAGTG 1620
AGAACTACAT GAAGAAACTC TTTCTTGAAA AACAAAACGA CAAAAAAGCA AAACAAACAG 1680
ACAAAATAAG GGTCCAATCA CCAGAATTTA AAAATTATTA GATTTTAGAT ATTTGTGGTC 1740
AAATAATTTA TAGTAAAAGA AATATTGTAA AAAAAATAAC CAGGGCTGAA GAGATGGCTC 1800
ACAACCAGAA AATAACCAAA CAATAATCTA CCACTCATAA AATCATGGTG AGGTACTTGT 1860
TGACAGCTTG CAGAATAAAG CTAATGGAAT AATCTTTAAC ATCCCTATAG CATATAACAT 1920
GGCCAACAAT ATTTTATTCC ATTTTAATAA TAAAAACCCT ACTAATTTAA TAACTGTTCC 1980
AGTCCAAACA AGCCCAAATA ATTTTTTTCC AATAACTAAT TGTATGTAGC TATCTAGGAG 2040
CAATGAATGA CTAACACACA GTAAATGATT AACACGCCAG TCTTTGTGAT TCCACTCCTG 2100
GAAGCATGGA AGCAGCAGCA ACAGGAAGAA AGTGTCTTAC 2140