EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00463

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:72459790-72463200

Target genes

Number: 8
Name	Ensembl ID

Mreg	ENSMUSG00000039395
D230017M19Rik	ENSMUSG00000085769
AC120136.3	ENSMUSG00000093333
Pecr	ENSMUSG00000026189
Xrcc5	ENSMUSG00000026187
Gm15843	ENSMUSG00000085812
Smarcal1	ENSMUSG00000039354
Rpl37a	ENSMUSG00000046330

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:72462481-72462493	TCTAAAAATAAA	+	6.07
MEF2C	MA0497.1	chr1:72462479-72462494	ATTCTAAAAATAAAA	+	6.5
NR2C2	MA0504.1	chr1:72462561-72462576	GAAGGTCAGAGGGCA	+	6.66
NR2F1	MA0017.2	chr1:72462107-72462120	CTCGTGACCTTTG	-	6.67
RARA(var.2)	MA0730.1	chr1:72461335-72461352	TGTCCTCCACATGACCT	-	6.33
Rarb(var.2)	MA0858.1	chr1:72461335-72461352	TGTCCTCCACATGACCT	-	6.01
Spz1	MA0111.1	chr1:72461092-72461103	GCTGTAACCCT	-	6.14

Enhancer Sequence

TTCTCCCTCT TCCACTAACA CACATGACGC CATCGCCACC ACCTCCACAC AAGTGTAAAA 60
TCTGTGTCCA GGGACCCATG TGCCAGCCGG GAAAGGACTG ATCAGTATCC TTAGAGTCAT 120
TTAAATCCAA ATGTGAGATG GTTATATAAT GCCATAAACA CAAACAAGGG AAGTGAGAAA 180
TAACAGACTC AAAACAGGAA GGGCCGGTGT GCACGAGGCC AGTGAAGATG TGAGAGCAGG 240
CGTGGTTTGC TCTGCCTATG TCCCCTTGTG ACCTCAGAAT ATTTTTACAA ATCATGTGCC 300
TTACGGGCAA ACCCTGATAG CACACAGGCA GGACAGCAGA AGACAGTTTG AGTAGTTGAT 360
GGACACGTTC TGGCCCAGGA AGCAGGATGT CAAAACAAGC CATAGATCCA CGTGGCCTTC 420
ACCTTCACAA TGGGTGGGCC ATTCCCAAAG GCTTGGGTCC TGAAAGGAGG GAGAAGGCTC 480
CCGTCTCACT CCGAAGAATC TAAGAGTCTA GAGAAAAGAA ACACCCATTG ACTGGAAGAC 540
TCAGACGAAG ACAAACTGAA CAAGGCTATA GATTAAGTGC CAGAGAATGT TGAAAGAATG 600
TTTCAGGAAG CAACTAGAAC TGGATTTCAG TAGAAGGGAA TGCTGTTAAG TTGGGAAGAA 660
AAGATGGACC CTTTGGTTGG GATAGGCGCT TGGTGTCTGA GCATGGTCTG AGCAGGTGGC 720
TCAACTAATT GTCCTTTGTG GTGGCCAAAC AGGGAAGCAA TCACATCAGA CAGTGCCTGG 780
ATGTCAACCA TCCTTGAACT TGTTCTTTAG ACTTGGTCCC ATGCAAGACG GTAGCATGCT 840
ATCCCCCATT CAATCGTGGC TGTAATTGGT GGTCTTGCAA TTTTGCTTAT TCAACGCGGT 900
GGTTTTCACT GAAACTGTAT TTACTATTTG TTCTCAGGGC TCCCAGTGCA GTGTTTTCCC 960
AGGGTGCAGG GGCTCAGCTG TGGGAACTAG GTTTTCTTGG CTCCCTGTAA ACTCCACCTG 1020
CTGAGAGATC CAGTTGTCTC TCTGCCAGAG TGATGAACAT GGTGCAAAGC AGGAAAGTGG 1080
GACAAGAAGA GAATGAATTG AAAGTAAAGG AAATAAAACA ACCGCTGAAA ACCCGACATC 1140
CAAGACGACA TCACCAATGA AAGTCAATGA GGCAAACACC ATCTGGCCCT GAAATATGAA 1200
CGAGCACAAA AGGGCGGCTA CAGCTCCTGG GAATCTGTGC TCCAACCGAG CACACGCTTG 1260
CTTTCCTAGC TGCCCGAGAC TCATCCTGGA TGGGGGCTGG TGGCTGTAAC CCTTCTGCAG 1320
AGCTCTCCAC GAGCGAGGTG AAGCTGGTTT TCATATTTCT ACTTGTACTT GCTCATTCAT 1380
TCCCCATATG CCATCCTTTC ATTAATCCTC TCTTCCTTCT CTTTCCCATC ATGGCCTTAC 1440
CTCGCTCCTG AATATTTGCT AAGACTTCCT AGTCAGCTCG CCTGCCTGCT GTGAGCTTTG 1500
CTTGCCAGGG CCTCTTTCCA CAGTTAAATC TGCCCTGACA CTCCCTGTCC TCCACATGAC 1560
CTATGTCTCC CATTGCCTGC AAGCAGTACC CACTCTAATC ATGCTGCTGC CTGCCAGCCA 1620
CTTCCGTCCA CACCCTGACC TGACCTTCCT TCCACGCTTG TTAAGTGATT TGCAGGCCCA 1680
TGAATGAGCC ACATTGTTTT ATGAATCTGT GTTTTTTTGC TGAGGGTTCC TCATCCTCGG 1740
ATGGTTTTCC TTTTGTCTCC TTTCACAGTA CCTTACATAC ATGTTTAGCG ATGCTTTAGT 1800
CAGAGGCAAG CATGGTGGCA ATTTAGTGCA TGTCCCTGAA GCCTGGTGCT GATGAGAGCA 1860
CTCACTGGCA ATGCCCCCGG CTACAACCTT TCTGCCTTTG TTTATGCCCA TAATGCCCAT 1920
AGACCAATGA CTGAGCACAG CTGCGTATTA AAGCAACCTC ACCTAATGGA CAGCATTAGT 1980
TCCAGGACAC CCCAAAACTC TTTTGGAAAT GCTCTAGTGT CTAAGATTTT CCTACTCATT 2040
TTCCATACGT CAGTCTGCAT TGAAGCATGA AGACTCTTTC TTCCTGCCTT TCCTGTTCCC 2100
ATCTCACCAG AGAAACTCCT GTCTAACCCT CTGTGTAGCT CATTTTCTGT TTTTATAACA 2160
GATTATCACA GACTGGTTAA TTTATAGAGA AAATGAATTT ATGTGTCCTT CAAAAGAGAA 2220
TTCATTTCTG CTGTAATGAC AATGCCTTCG GATCTGAGGG GAGGTCTTAG GCCCCGTCCA 2280
TCATCCAATA TCGCTGCCCT TGGAGTTCAG TTTCCAACTC GTGACCTTTG GGGCACACAT 2340
TCAAACCATT ACCCACGTGT TAGATGCCTT CCTAGACTAA CAGGTCAGCA TCACCTTGTC 2400
CTGGAAGCCT TTCCTGTCTT GGTGTGAAAC TGGACCTGCT CTCCCTCATA CCACCTGCCT 2460
GCCTGGGCTG TGCTTCATGA GAGCACGGGT TTTAGATTTT ATTTTTATCT TTATGTCATT 2520
TGTGTGTATG TGTGTGTGCC ACAGGCACAC ATGCAGAGAT CAGAGGACAG CCTCTGAAGT 2580
CACTTCTCTT TTTCTATGAC GTGGCTTCTG GGGACTGAAC TCATGTTCTT GTCAGGCTCA 2640
GCAGCAGGGT GGCAAATGCC TTTACCCAGT AAGTCACTGA GCCTACACCA TTCTAAAAAT 2700
AAAAATTAAA AATAGTGTTT GTGTGAGTGC ACACATGCAG GTGTGCATAT ACGCATGCAT 2760
AGAGTATGTA TGAAGGTCAG AGGGCAACTT TCAGGGCTGG GCTGTCTCTT TCCACTTCCG 2820
TTTTGCCATG GCTGTCCACT CTAGGCTAGC CTGCCTGTGA GCTACTGGGT GATTCTTTTA 2880
TCTCTGTCAC CCATCTCAAT ACCAGGTATG GAGATTACAG GTGTGCCACG CCTTATCTTT 2940
TACAAAGGGT TTAGAGGACG GAATGTGGCT TACTGGGTTT GTGAGACAAC CATCTTTACT 3000
TGCTGAGCCA TCTCCCTGGC CCACTTTGTA CTATAATTCT CTGTCTCTGA CTGTCTTCAT 3060
CTCTCAGATT GCAGGTTCCA GGAAGTTGGG GAATCCAGCT TGAACGATCC ATGAAGTTGT 3120
TCATCCTGCC AATGACCCGT CCTAGCACAG TGGCTGTCAT GCATGCCGTG GCATGGATGA 3180
TCTCTTCACT GACGTATTCC TCACTGGCCT ACACTATGTG TTAGGAACCA AGAACAGGGA 3240
GATAGTGAAT CTGAATTTCT TGAACATACT CAAAGGCTGG CCTGGAGGAC TAGCTGCAGA 3300
TTAATCTATT CTACCTGACA CTATGGTCCT AGAAATAAGT AAAAAACTGA AGGAGGTGTG 3360
TGTGTTTGCA CTGGGCGGTG TCAGAGGGAT GAGGGATAAG GAAGGGTTCC 3410