EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00396

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:63066190-63067400

Target genes

Number: 8
Name	Ensembl ID

Gm11603	ENSMUSG00000081429
Gm11602	ENSMUSG00000084799
Ino80d	ENSMUSG00000040865
Ndufs1	ENSMUSG00000025968
Eef1b2	ENSMUSG00000025967
SNORD51	ENSMUSG00000064612
Snora41	ENSMUSG00000064602
Gpr1	ENSMUSG00000046856

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXB1	MA0845.1	chr1:63067025-63067036	ATATTTACATT	-	6.32
JUN(var.2)	MA0489.1	chr1:63066661-63066675	GGGAGATGACTCAC	+	6.02
NKX2-5	MA0063.2	chr1:63067206-63067216	CTCAAGTGGT	-	6.02
ZNF263	MA0528.1	chr1:63066393-63066414	TTCTCCCTTTCTTCCTCCTCA	-	7.43

Enhancer Sequence

GGTGGGTAGG GAAGTAGGGA GAGGGTATGG GGGACTTTTG GGATAGCATT GGAAATGTAA 60
TTGAGGAAAA TACGTAATAA AAACATTAAA AATTAAAAAA AAAAGTGTGC ATGAACACTT 120
GTGGAATTGT TGAGACATGT GGTCAAGCCC AGTCAAAAAG TGTGTTTCTG CATGTGTCTA 180
TGTGTGTGAT GTGTGTGCCT GAATTCTCCC TTTCTTCCTC CTCAATCCCT GAATTGAATC 240
CTCAGATCTG CATAATATTA CTTCTCTGTA ATCCTGGCAT TTGAGTACTG GAGGCAGGGG 300
ATTAGAAATT CAAGGTCTTC TTTGGCTAAA TGAGAGCCTA TCTAAAGGGA GGAGTCAGTA 360
AAGACATGTG CCTTTAATCC CAGAATTTAG AAGGCTGAGG CAGGAGGAAG AGGATTACAA 420
ATTCAAGATC AGCTTGGGCT TCATAGCAAG CTCGTAGCAA AAGCTGGGCT AGGGAGATGA 480
CTCACTCAGT AAGTAAATTT ATTGCTTTGC AAACATGAGG ATCCAAGTTC AATCTCCAAC 540
TCGTTGATTA CAAGGCTGGG TGTGTTAAGG GAAATTGGGG GCTGGAGAGA AGGGAATAAA 600
GTGGAATAGA AGTGGAAGTA GGGATCATGG GGGCAAAAGG GAACAGTGGA GAAATGAGAA 660
ACAGGAAGAC AAGAGAGGAG GGATCACCAA CCAAAATGAA AATCCCATGT GAAAGCAAGT 720
TACTTTGTGA GCTGATTTTA CAACACACAC ACACACGCAC ATGTCAAGCT GGGAATGATG 780
GCACACTTTT TATTTATTTA TATTTTTCTG AGGATTTCAT TCATCCATAA GTACCATATT 840
TACATTTTTA CCTTTTACTC TCCCCAACCA ACTCCTCCCA TGTCTTCCCT TGCTGTCAAA 900
TCCATTCTAC TTATATGCAT ACATACATAC ATATATACAT ACATACATAC ATACATACAT 960
ACATACACAT ATGCCACACA ACATACTGAG TCCATTTAGT ATTGTTCATA TGTGGGCTCA 1020
AGTGGTTAAG AACACTCACT GCTCTTCCAA AGGTCTGGAG TTCAATTCCC AGCAACCACA 1080
TGGTGGCTTA CAACCATCTG TAATGAACAT ACATTAGATA GATAGATAGA TAGATAGATA 1140
GATAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA GATAGATAGA TAGATAGATA 1200
GATAAAGTTC 1210