EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00317

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:58403190-58404600

Target genes

Number: 7
Name	Ensembl ID

Sgol2	ENSMUSG00000026039
Aox1	ENSMUSG00000063558
Bzw1	ENSMUSG00000051223
Clk1	ENSMUSG00000026034
Nif3l1	ENSMUSG00000026036
Ppil3	ENSMUSG00000026035
Ndufb3	ENSMUSG00000026032

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:58403245-58403256	TTCTTATCTGT	+	6.14
Gata1	MA0035.3	chr1:58403245-58403256	TTCTTATCTGT	+	6.62
Gata4	MA0482.1	chr1:58403366-58403377	GAGAGATAAGA	-	6.32
HINFP	MA0131.2	chr1:58403256-58403268	ACGCGGACGCTG	-	6.52

Enhancer Sequence

TGTGCAGGTG ACTGCTCGCA TCTCTGTCCC CGGTGACCTT TACCACACCT CTGGTTTCTT 60
ATCTGTACGC GGACGCTGTG GTTGGCTTCA GGGAGGTGAT CCATCACTGA ATGAGTTATT 120
TTTCTACTCC AGGTTAACTT AGAGAAAGAA AGGTTTGTGT GGGGCTTATG ATGCCAGAGA 180
GATAAGAGTC CATCGCCATC ATGGCGTGGA CATGTGGCAA TAGGCAGGCA TGGCAACTGG 240
AGCTGCAGCG GGGAGCTCAC ATCGTGGACC ACAGGCAGGA AGCAGAGAGA GGACTAGGTA 300
TGGTGGGAGT CTTTGAACTC GCAAAGCCCA CCCCCCAGAG GCATTCTTCT TAAACCTCCC 360
CAAATAGCAC CAACTGGGGA CCAAGTACTC AGAGACTCTG GGAGAGATTT AGTATTCAAA 420
CTACCACAGT TACTAAATAA AAAGTTAGAC TACCAATATA TTGGGAGCAT ATATGAATTA 480
GAGCAAAGTA ATACATAGAC CCAGAATATA ATGGTTCAGA TACAAAAGTC CCTTTCATGC 540
ACACATCGGA GTCCAGAGGG AGTCTTTGGT CAGCCAGACA TCCAGACTGA TGGTGGCACC 600
ATTAGTGTGG CTTTCTATGT GGATCTGAGC TTCATTTCAA CTGCATGAGG TCATGCATGA 660
GGAAGACTCC AGGCTAGACC TGGAAGTGAT GCAAGCCGCT TGTACTCATA GTCCCTTAGT 720
AAGAGTTAGT CTCCGGTTCT ATCTACATAC TCTACAGACA AGGAAAGTTG GTGAACAGAG 780
AAGATAGGGA AGGTGTATGC CCAGCTCCTG TGAAGGAGGG AGACTTCATT TGAGTGAACA 840
GTAACTCTGT TTCTGGGAGA CATCGAAGAA GCTTTAAGAC CCAACAGTGT AGAAACATAC 900
TTGTTTCCCT GGCCTGGTGA GTTCCTACAG GCTGACTAAC TGAGCCCAGC CCAGCCCAGC 960
AGACATACTA ATTACAGAGT GGCCACCAGT GCCCCCACCA GAACACCCAG AGTCACCTTC 1020
TCTTGGAACT CTTTCAATTA ACATACAAAG TAATGGGTTT CTTACTAAGT TAACTGATTT 1080
AGGAATACTG ATCTTCTAGG TTGATTTGTT ATCTTTTTTA TTATTTTAGT ATGTTACTAT 1140
TTTTTTATGT TTATGGGTTT TTTTGCCAGC AGGTATGTCT GTGACCCACA TGTGTGCTTG 1200
GTGCCTGCTG AAGGCTAGGG TAGGGTGTTA GATCCTCTGG AACTGGAGCT ATAGAGTTGC 1260
CACATGGGTG CCAGGAAGAA TAGCCAGTGC TTTTAACTGC CAAGCCATTT CTCCAGCACC 1320
GGGACGTTTC TGAGACAGCA TCTCACTATA TAGCTCAGGA TGCCTGGCAA CAGGTTGTAT 1380
ATCCCGAACT GACCTCAGAC TCATGACAGT 1410