EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM088-00114

Organism

Mus musculus

Tissue/cell

Large_intestine_epithelial

Coordinate

chr1:35986400-35989600

Target genes

Number: 3
Name	Ensembl ID

Hs6st1	ENSMUSG00000045216
Neurl3	ENSMUSG00000047180
4632411B12Rik	ENSMUSG00000010453

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr1:35988404-35988419	GAGTTCAAGGCTAGC	+	6.13
RARA(var.2)	MA0730.1	chr1:35987537-35987554	TGACCTGAGTTTGACCC	-	6.04
Rarb(var.2)	MA0858.1	chr1:35987537-35987554	TGACCTGAGTTTGACCC	-	6.3
SP1	MA0079.4	chr1:35987983-35987998	CAAGCCACGCCCCTA	+	6.72
SP4	MA0685.1	chr1:35987983-35988000	CAAGCCACGCCCCTAAA	+	6.56
SREBF1	MA0595.1	chr1:35986927-35986937	GTGGGGTGAT	-	6.02
ZNF263	MA0528.1	chr1:35989215-35989236	AGAGGAGGAAAGACAAAGGGA	+	6
ZNF740	MA0753.2	chr1:35988479-35988492	ACGCCCCCCCCAA	+	6.05

Enhancer Sequence

TGTGTGTGTG TGTGTGTAAG CCAAAAGTTA ATATCATGTC TTTCTCAATC ACTCTCTACC 60
TTATTATTTT TAAGTTTTTT AAGTTTGGTG GGGTTGGGGG GTATTTTTTG TTTGTTTGCA 120
TGTTTTTGTT TAAGTGTGTG TACCTGTTTG CAGGAACTTG TGGAGGCCAA AAGAGAGAGT 180
TGGATCCCCT GGGACTAGAG TTATAGTTAG TTGTGAGCCT CCGGATGTGG GCCTTAAGAA 240
CTGGAGTCTG GTCCTCTGCA AGAGCAGCAA GTGCTCTTAG CTACTGAGCA TCTCCCTAGC 300
TTCAACATTC CTTACTTTTT GAGACAGTCT CTCAAAATAA ACCTGGACTC ATTGGTTTGG 360
CTCAGCTGGC TGGTCACTGA ACCCCAGCGA TCCCCCTGCC TCTGTCCACC CTGTGCTGTG 420
GTTACAAGAG CTCACCACCA TGCCCAGAAT TTTGACCTGG GTTCTGGGCA TTAAACTCAG 480
GGTTTGCAAA GCAAGTACTT TACCAATTAA GTCACCTTTC TCCTGCAGTG GGGTGATCTG 540
CTCTGCAGCC TGCTTTTTGT TCAGTCATCC CTTGGTATCT TCAGACAATT GGTTCCGGGC 600
CCCTCTACAG TTGACAAAGT CCATGGGTGC TCAAGTGTTC ACGTATGACA AACATACATA 660
CCCCAGGTGC TTTAAATAAT CCCTTCACTG CTTACGACAC CTGATACAAT ACAAACCAGT 720
CTATTTAGGG GATATGAGGA TAGAGAGCTA TACATGTTTG ACACAGACAT AATTATTCTC 780
TACATATCTT CCATCAGAGA AATGCTAACA AATGCTAAAC CCACAGATAC AGATGCCCAC 840
CTGTGTCAGG TTTTGTTGCA AGCATCTTGT CTTGTCAATT CGTGTGCTTG GTAAAAACCT 900
TTTGATGGCT ATACCCCACC CCCAGGGCAA TGACTGACCT GTCTCTTTTT GGCCCGAGAG 960
TTCAGCACAA GCTGTGTCTG GACATGCTCT CTCTGGGAGG TTTATAGGCC AGGACGAATG 1020
AATTCAGGAA CACCCACACA TGCCAATATG GTAAGAACAT TCCATTTCCT CTTCATTTTA 1080
AAATAGTCAT CTCTAATAAA AAATATAGTT TGGCCTGTGG GTTGGCCTCC TTCTGGATGA 1140
CCTGAGTTTG ACCCCAGGAC CCAGATGGTG AAATGAGAGA ATCTACACCC TCAAGTTGTT 1200
CTTTGGCAGT CACATCCCTG CCAAGGTGTG TATACATGTG CCAGTACAGC ACACAGCATG 1260
GGTGCATGTA TGCACATGTG CACACACATT CGCGAGCACA CACACACAAA CACACCCATA 1320
CATTTTTTTT AAAGGAAAAA AGGGATTTAA GGTAAAGACT GGCCTTTCCT ATGTTAATAT 1380
GCTTCACACT TGTCTCTTTT TGTTGTTGTT TTTTGTTTGT TTTTGTTTTG TTTTGAACGT 1440
AACTTCTGTT CATTTGCAAA CCAAAATTGC AAGCATGGTA TGAATTTGTA AGCCCACTTT 1500
TTCGCACACA TGCTTCTTGG GCAAACATTT TCTCCTGTTC TCTCACACCT TCAGAAAATT 1560
ATTAACCTGC TGGCATATTT TAGCAAGCCA CGCCCCTAAA GTGCACGTAA ACGGTTGCTG 1620
TTTGACATCT GTATAAGCAA AGCTTCAAGG TTTCTCTCAG GAATCACACC TGTGAGTCCA 1680
AGGGTGACTC ACCTTGGGCG GAGTCCATGT TTGCCCTGCT CTGGTCCTTT CAGGATCTTG 1740
ATGACTTCCT GGGGCAAACT TTCCCTGAAC GCCCCAGGCC CTTTGTGTCC CTCCTTCAGG 1800
TGTCCTGTCT GGACAGTCTT CAGATGCCCC AGGCGGGCTG TGCTAACCAC TGGGGCCTGA 1860
CTAGAGAGAT GCATGTGAAA CACACCAAAG AAGACAGGAC AGGCAGATAA AGACTGGGAG 1920
AGCTAAGAAT GATGGGCAGA TCTGGGCAGT GGTGGCGCAC ACCTTTAATC CCAGCACTTG 1980
GGAGTCAGAG GCAGGTGGAT TTCTGAGTTC AAGGCTAGCC TGGTCTACAA AGTGAGTTCC 2040
AGGACAGCCA GGGCTATACA GAGAAACCCT CACTCTCCAA CGCCCCCCCC AAAAAAAGAA 2100
TGATGGGCAG AGAAAAACAC AAGAACAAAG AGAATGCTGG GAAAGACAGA GGGCCAGGCA 2160
GGTCCTGGCT GCTAGTGCCC ACCATGCCCA TCCCATGACA ACTCACTGAG CCCCTCACAG 2220
TCTAACCTAC ACTCCAAAAA GGCAGAGACT TCTCCAGAAT GGCTCCCTAG GTCCCACTAG 2280
GTATCTGATG GAAATGAAGC CACTCCTGGT TTGGATCCAG GCAGCCTTTC CCAACTCTGG 2340
AAAGGAATCT CCCTGAATGC AGATGCAGGA GCAGTTGTTC AAGAGGCATT AATGCATGTG 2400
GCCCAGGTCA AGGCAGCTCT TCGGGCCCTG AGAGATGGTG TTCCTATGTC TCCCATCTCA 2460
ACCCCTCTGC TGCTCCTGCC TTGCTGCCCG CTGCTGACCA CACCCCTTCT GTACTTTCTC 2520
CTAGTGCCTT TCAATTGGCT GCCTCAGCTG CCCATCTCTA TTTTCTAGAA TCTAACGTCC 2580
CCATCCCAGA CAAGCCCTGA CTCCACCAAC CTGCAGCAAG AAGAGCATAG ATGAGCAACA 2640
TGGTCATAGC AGGGATACCA GCAGAGGTCC AGGGCTCAAG GGCACAAGTA TTTGTGCCCA 2700
CGAATGGGAA GAAAAGAACC ATACAGAACA CATGGCCTAT CGAATCCTAC AGCTCTATGA 2760
CAGCAAGAAA TCCTAGGAAG GAAACTCAGA GGCCTTGGCC ACCCAGGGCT TTGCCAGAGG 2820
AGGAAAGACA AAGGGAGCAG ATGTCAATCA ACAATGAGGA GCTGGTAAGA TGGCTCCATG 2880
GGTAAATGCA CTTTCCACAC AAGCCTGATG AGCTGAGTTC GACCCCCAGA ACCCATGTAA 2940
AGGTGAGAGA AGAGAACCAG CTCCACAAAG TTGTCCCCTG GTCTCTACAC ACGCACCCAC 3000
ACACATAAAC AATAGTCAAT GATAATACTG CCCAACTAGT AAAGTTCTAA CCTTGCAAGC 3060
ATGAGGCCCT GTCTTAGTTA GGGTTTTACC GATGTGAACA GACAGATACC ATGACCAAGG 3120
CAACTCTTAT AAAGGACAAC ATTTAATTGA GGTTGCCTTA CAGGTTCAGA AGTTCAGTCA 3180
AGGTGGGAAC ATGGCAGCAT 3200