EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-29135

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr9:21649230-21649880

Target genes

Number: 20
Name	Ensembl ID

Ldlr	ENSMUSG00000032193
Spc24	ENSMUSG00000074476
Kank2	ENSMUSG00000032194
Gm6484	ENSMUSG00000047822
Dock6	ENSMUSG00000032198
Rab3d	ENSMUSG00000019066
Tmem205	ENSMUSG00000040883
Ccdc159	ENSMUSG00000006241
BC018242	ENSMUSG00000040563
2310047B19Rik	ENSMUSG00000051238
Epor	ENSMUSG00000006235
Rgl3	ENSMUSG00000040146
Ccdc151	ENSMUSG00000039632
Prkcsh	ENSMUSG00000003402
Zfp653	ENSMUSG00000038895
Ecsit	ENSMUSG00000066839
Cnn1	ENSMUSG00000001349
Elof1	ENSMUSG00000013822
Acp5	ENSMUSG00000001348
Pigyl	ENSMUSG00000010607

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr9:21649852-21649869	TGACCCCTCAGTGACCC	-	6.58
RARA(var.2)	MA0730.1	chr9:21649812-21649829	TGACCCCTCAATGACCC	-	6.72
Rarb(var.2)	MA0858.1	chr9:21649812-21649829	TGACCCCTCAATGACCC	-	6.01
Rarb(var.2)	MA0858.1	chr9:21649852-21649869	TGACCCCTCAGTGACCC	-	6.01

Enhancer Sequence

GACTCTGTTC ACCGTTGCCA GGGAAGAGGA GTTCTTGCCT CCAGGTGTAT GGCTGGCCTA 60
GAACCACCTA CAGTCAGCTC TGCTCACAGC CTGACTCCAA TCTAGTTCAG TCTGTGACTC 120
TGAGTCTCTA ACCTGACTAC CAGCTTCAGT TTCTCCTCCT GCATCTCGTC CCCTTATCTT 180
CTCTCCACCT CCCTCCCTGG CCCCTGCCCC AGCTGAGGAT GGAACCCATG CCTAGCATCT 240
GCACAAACAC TTCGCCCCTG AGCTGAATCC ACACCTCCTG AAATACATCC TACAACAACA 300
GAGGAATTCA CACTAGTAAT AACAAATGAT TATTGGCATA CAGTAAGTGT TCAGTAAATG 360
CTGACTGAGG AGATATAAGC ATTAGTAATT CTGCTGTGCC TCAGTTTCTC TGCCTGTGAA 420
GAGGGATAAT GGTTGTGGCC CCACTCACAG GATGAAAGGA GCACAAGCCG GCAGTATACA 480
CTAAGCACTC AATAAATGTG CATGATTGTG ACCCTTTCCA CTCCTGAACA GGGCTTACTT 540
TACTCAGTGG GGTCAAGGCT GAGCAGGCCA CTTTCCTGAG TCTGACCCCT CAATGACCCC 600
AGTCGGCCAG CAGCCCTGAG TCTGACCCCT CAGTGACCCC AGTCGATGAC 650