EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-27992

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr8:73314850-73316120

Target genes

Number: 26
Name	Ensembl ID

Slc25a42	ENSMUSG00000002346
Crtc1	ENSMUSG00000003575
2810428I15Rik	ENSMUSG00000058833
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
2810422J05Rik	ENSMUSG00000055553
Ell	ENSMUSG00000070002
Isyna1	ENSMUSG00000019139
Ssbp4	ENSMUSG00000070003
Lrrc25	ENSMUSG00000049988
Gdf15	ENSMUSG00000038508
Pgpep1	ENSMUSG00000056204
Lsm4	ENSMUSG00000031848
Jund	ENSMUSG00000071076
Gm11175	ENSMUSG00000080058
Pde4c	ENSMUSG00000031842
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Mast3	ENSMUSG00000031833
Il12rb1	ENSMUSG00000000791
Arrdc2	ENSMUSG00000002910
Kcnn1	ENSMUSG00000002908
A230052G05Rik	ENSMUSG00000020887
Slc5a5	ENSMUSG00000000792

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr8:73315248-73315259	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr8:73315245-73315260	GAGGCCACGCCCCCA	+	7.03
SP3	MA0746.2	chr8:73315247-73315260	GGCCACGCCCCCA	+	6.57
SP4	MA0685.1	chr8:73315245-73315262	GAGGCCACGCCCCCAGA	+	6.54
SP8	MA0747.1	chr8:73315248-73315260	GCCACGCCCCCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01561	chr8:73314859-73371125	Th_Cells
mSE_04239	chr8:73314242-73316386	Cortex

Enhancer Sequence

CTTCGCCTCC ACCTTGGCAG AGTTGAAGTC ACAGGGATCC TGCCCTCCTT CCCAGCCCCC 60
TACAGTCACC CAGCAACGGC GGCTCTGACT GAAGGCAAGG AGAGCAGCCC ACACAGCCCT 120
CCACCAACGC AGCTCTGTAA AAGTGTCAGG GAGGGAGCGA CAGGAGGGGC CCTAAGGAGG 180
CAGGGAGGGT TTTGGGTAAC AGAAGGGCAG TTTGCAGGCC AAGATAGGAG GTGCCGCAGG 240
CAGCAAAGGG CATAGGTTTT AGGGAGCTGA GCCCAGCCTG TCTGTTGCTG CAGGAGGCTC 300
TGTTTTCCCC ATCAGGACAA CCAGAAGGTG CACAAAATCA ACACACCCTG TGAAGCTGGC 360
CTTGGGGGAC CTATGCTCTA AGAGCCTGCC TACAGGAGGC CACGCCCCCA GAGTCAGCTA 420
AGCCACAGGT GTGGACACAG TACAAACCAG CATTGAGCTG GGGGACCCAC CAACTGTACC 480
TGCTCTTCAC ACAGGGAAAT CGGGGCTACC AGCTACCAAG AGGGTAAAGA ATTGCCCCCT 540
AGGCTGAAGT GTGGGTGCAG AAGCGGAACC CAAAGGGCCC TGCAAGACTT CCTGTCGCCC 600
CCCCTCTGCA CACGACACAC ACTGGCAGCC ACATCCTCTC CCTGCCCTGC TGTCCCATGG 660
TCCTGCACCG GTAGCCAATG AGACTGGTTG GTTCCTTTCC CTTATGCTTA GACAAGACCT 720
TGAAAACAAC CATATTGGAC GCCTCAGAGA ACCTGGATCA TCTCACTTGA GCACACATTA 780
AATGCCAACT GCTTACACTG TTCCTTGCTC TAAAAGGCCT GTAAGCCATG GTAGGCACCA 840
CACTATCTCA AGGCCCAGTC GAAGCTTTGG ATCGAGCACT CAGGGTCCTT GCATCTCAGA 900
CTTTTCCCAA CTATGCTAAC CTAAATACAG AGAAACACAA GCACAGAGAG GTTGAAGAAC 960
TACCTGGAGT CACACCGCAC GGTAAAAGCT ATCTTACAAT TAGAACCTGG GTCGACAGTT 1020
GAGGCACCAT CTCTCTTGGC CTCTGTGCCT TGCAAAGGAG GACCTGGGCC GAGGAGAAGC 1080
ATGCCTTCTT GGCTGTAGAC CTGCCACCCA CTCGTCAGTC TGGGCCATGA GTATTTGCAT 1140
CTGCGCCAAC ATTTCCGCTG AGTGTCCAGA ACAGACTGCT TCATTCTTCC CAAATTCATC 1200
GCTTTGCAAG GCCCGAGTCC CAAGTTCAAA TACCGGCGTC CACAGCTAGA CCCTGCGCCC 1260
CAAGCCGTCC 1270