EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-25782

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr7:29612180-29612830

Target genes

Number: 25
Name	Ensembl ID

Rps16	ENSMUSG00000037563
Paf1	ENSMUSG00000003437
Sycn	ENSMUSG00000084174
Nccrp1	ENSMUSG00000047586
Pak4	ENSMUSG00000030602
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Mrps12	ENSMUSG00000045948
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Nfkbib	ENSMUSG00000030595
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Ech1	ENSMUSG00000053898
Lgals4	ENSMUSG00000053964
Lgals7	ENSMUSG00000053522
Capn12	ENSMUSG00000054083
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Map4k1	ENSMUSG00000037337
Rasgrp4	ENSMUSG00000030589
Psmd8	ENSMUSG00000030591
Kcnk6	ENSMUSG00000046410
Yif1b	ENSMUSG00000030588
Spint2	ENSMUSG00000074227

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF740	MA0753.2	chr7:29612782-29612795	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr7:29612779-29612792	CTGCCCCCCCCCC	+	6.33
ZNF740	MA0753.2	chr7:29612784-29612797	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

TGTGATCAAT TTGACAGTGT TGGCTCACAA CCATCTGTAA TGAAATCTCA TGCCTTCTTC 60
TGGTGCATCT GAAGACAGCT ACAGTGTACT TAGATATAAT AATAAATAAA TCTTTTTTAA 120
AAAGTATATA GGTTCTTAAC TGTTGAGCTA CGCCATTAGT CCTCAGTGGG TTTTTGTTTG 180
GTTGGTTTTC TGAGACAGGG TTTCTCTGTG TAGCCTTGGC TATCTCGGAA CTTGATCTGT 240
AGACCAAGTT CAGGCTGGCC TGGAACACAG AGATCTGTCT GCCTCTGCCT CCTGGGCACT 300
GGGATTTAAC AGCTTGCACC ACCATGCCCA GCTTTTTTTT TTTTTCTTTT TTTTTTTTTT 360
TCAGTCTAAT TTAAAACATT CACCCGTGTG TGGGTGTGTG TACTCAGGAG TTGGCTCAAA 420
GCCCAGAATT CCCTCCCTAC CACAAATTCA AGCATAGAAA TTAGCTCAAC AGAACCTGCT 480
AGGATCCTGA AGTTGGATTA ACCGCAGTAG ATCTGTAACC TTGAATGAGG CTCTGGACCT 540
TTCAAAACCT ACAGGGGTGT CTAGCCAAGG GTGTTACATG CAGTGACTTC TGCCTACCCC 600
TGCCCCCCCC CCCCCACGTG CACACACACA CACACACACA CACACACACA 650