EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-25602

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr7:20329750-20330950

Target genes

Number: 22
Name	Ensembl ID

Mark4	ENSMUSG00000030397
Exoc3l2	ENSMUSG00000011263
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Clasrp	ENSMUSG00000061028
Relb	ENSMUSG00000002983
Clptm1	ENSMUSG00000002981
Apoc4	ENSMUSG00000074336
Apoc1	ENSMUSG00000040564
Apoe	ENSMUSG00000002985
Tomm40	ENSMUSG00000002984
Pvrl2	ENSMUSG00000062300
Bcam	ENSMUSG00000002980
Cblc	ENSMUSG00000040525
Gm16175	ENSMUSG00000087206
Gm16174	ENSMUSG00000087593
Bcl3	ENSMUSG00000053175
Gm16184	ENSMUSG00000089886
Pvr	ENSMUSG00000040511

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr7:20330509-20330522	TAATTAATTAATT	+	6.78
Lhx3	MA0135.1	chr7:20330510-20330523	AATTAATTAATTA	-	6.78
POU6F1	MA0628.1	chr7:20330511-20330521	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr7:20330511-20330521	ATTAATTAAT	-	6.02

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_05137	chr7:20329600-20330858	E14.5_Heart
mSE_06740	chr7:20329455-20331178	Heart
mSE_08310	chr7:20329577-20331096	Kidney
mSE_11316	chr7:20325751-20336985	Placenta

Enhancer Sequence

AGTAGCAATG AAATAAACTT GCGGTTGGGG CTTCCTAAGA TCACCGGAAA GCGGTTGAGA 60
ACCTGCTGAT CTAGTTGGAA GTTTTCTCCC AAGTGGGAAT GGGAGCAGGA CATTGGGCTT 120
GGGGAGGAAG ACAGATGCAT AATGACTTGT GGCGTTTGAA GTCTATGTGG TGAGGGGAGC 180
CAGGGGTTCT GGGTGTCGGA TGGGGAAGCA GGGGAGATGG AGTCGTGAAG CCGGGGAAGA 240
TGCGTGGCCT TGTGCAAGAA ACACATTTCC TGCAGGCTTC TCAGCAAGTG GCGGTGGTGA 300
CCTTGCAGGG ACAGACACGG ACAGCCAACA CCACGCCCAG AGACAGTGGC CAGTGGGAAC 360
ACTTGCTTCT CTGCCTCTGA CTGGTGACAG CTCTATAGAG ATGTCAGCTG GGTCTTCAAA 420
CACACTTCCT CCTCCCCTGG GGAATGGACT AGCAGGCTTC CTGCAGGCCA GAGTAGAGAC 480
TGCCTCTGGC GTAGGTAAAG CCCAGACTGA GGAAAGACAC GGGAGGGTTA GACCTGGGGG 540
GATAATAGTC TGAGGGAGGA GGCTGGAGGA GGGTCTGGAA GCCTAGTTTC TTAGATTTCC 600
GGCCTGGCTG GCTCCTCCAG TCCCAGCTGG CCCCTGCACA CCTATAAAAC AAGCTGTGTC 660
CTAGCCCCCA CCATATCAGG GTGGGGCAGG GCTGGAGCAA ACCCTTCAAG GCCAGAGGGC 720
TTTGAGGACC AGCATCAGCT GCTGCCTCAG CCACCTGGGT AATTAATTAA TTACATTAAT 780
CATAGTTTCC ACCCCCACAG TGGACATCCG GAGCCTGTCT GAGGGGTGAG AACTCAGCCA 840
GAGCTGCCAG GGTACGTGGC TTGGGCTGTG TCTGGATTTC TATGTGAGCC TCCCGAGGCC 900
CCTCTGGACC CTTGGATGCG CAGCCTCCTG CTGCTGCTGG GGCTCAGCTC CCAGAGGACC 960
TCTCCTATGG AAGGACAGGC TCATGGGGTG AAGCTCTCAA AGGCTCTCCT GGCTGGGGCC 1020
TGGGATAGAC CACTCTTGGT CTGCCGAGAG AGCGGACACC TCAGTGTGAA TCCCCATTCC 1080
AGGAGATTCT GGCCTCTGCT GGTGTACAGA TCCTACTTCT AGGGTCTGTT TCTCTCCCCC 1140
TGACCCCTTG CCTCTCATTC CCTAGAGTGC GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA 1200