EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-20888

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr4:124435920-124437190

Target genes

Number: 14
Name	Ensembl ID

Pou3f1	ENSMUSG00000090125
Utp11l	ENSMUSG00000028907
Fhl3	ENSMUSG00000032643
Sf3a3	ENSMUSG00000028902
Gm12917	ENSMUSG00000083104
Inpp5b	ENSMUSG00000028894
Gm12915	ENSMUSG00000086589
Mtf1	ENSMUSG00000028890
Yrdc	ENSMUSG00000028889
1110065P20Rik	ENSMUSG00000078570
9930104L06Rik	ENSMUSG00000044730
Cdca8	ENSMUSG00000028873
Gnl2	ENSMUSG00000028869
AL626775.1	ENSMUSG00000078049

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXK1	MA0852.2	chr4:124437015-124437029	TCCTTGTTTACCTA	-	6.91
Nr2f6(var.2)	MA0728.1	chr4:124436557-124436572	TGAACTTTTGAACTT	-	6.19
RARA	MA0729.1	chr4:124436554-124436572	ACTTGAACTTTTGAACTT	-	7.59
Rarb	MA0857.1	chr4:124436557-124436573	TGAACTTTTGAACTTG	-	6.96

Enhancer Sequence

GTCTTCACTG TGTAGCCCTG GCTTGCCTTG AACTTACAGA GATCCACCTG CCTCTACCTC 60
CCAATGCTGT GATTAAAGGA GTGTTCTGCC GTGACCAACT AGGCTGAATT GCTGGAAATT 120
GTATTTATTT GTGTCACACA CAAACATGCT TGTGCGCATG CACACATATA CACACACACA 180
CCTGCACATA CGCGCGCGCA CACACACACA CACACACACA CACTCCTGTA CATACACACC 240
CCTGCACGCA CACATGCACA CACACACACA TACACCTGCA TGCACACATG CACACACACA 300
CACATACACC TGCACGCACA CATGCACACA CTCACATACA CCTGCATGTA CACATGCACA 360
CACACACATA CACCTGCACG CACACATGCA CACACACACA TACACCTGCA TGCACACATG 420
CACACACACA CATACACCTG CATGCACACA TGCACACACA CACACATACA CCTGCACACA 480
CACACACACA CACACACACA CTCATTCATG TGCCATGAGG CAAGTGTGGC GGTTCTCTCC 540
TTTTACCATG CGGGTCCTGG AGATTAAACT CAGACTATCA GGCTCAGCAA CAAGAGCCAT 600
TCCTTTAGCC CTGGCTCCAT GTTTATAAGC TTGAACTTGA ACTTTTGAAC TTGCCGTTCT 660
TGGCAGTTTT TGTCAGTAAG TTTGGAAAAA AAAAGTCTGT CTGAGCCAGC AAGGTGTGGC 720
TCAGGCCTGT AATTGTAAAC ACTAGGAAAG TGGAGGCAGG AGGACCAGGA GTTTGAGGTC 780
CACCTGGGCT GCTTGAGGCC CTGTCTAAAG GGAAGAGAAA AGTCTGCCCT TGGCTGAGCT 840
GAGGAAACTA TAAATTATAG TCTTCACTTG CAGCATGTCC CTCCCGCCCC CTCCCAGCCC 900
AGCTTCCTGG CTTGGTCTTC CTTCTTCTTT GTCTGCCCTA TCACTAGACC ACAGACAGCG 960
CACTGAAGGC CCTCTGAAGA GAGCGAACCC GGAGGAATAG GTACGTCACC TCCAGTAGGC 1020
CAGCACCCCT GACCTGTGCC AAGCGGTTGT GCCAGCAGAG CCTCTCTCCT TGAAAGCTTG 1080
GCTGCTTGTT TTCAGTCCTT GTTTACCTAC TCTGATTTGT ACAGGGAACA TACCAGACTT 1140
TGAATTCAAG ACTTAGAGCA AAAAAAATGT GGATTTTAGA CTTGAGTTTC TGTCTCCCCA 1200
CTACACCTCC TTAAACATTT TGATCTTGAT TTTCCTGCAT CCACCTAAAG TGCTAAAATT 1260
ACAGGCATGT 1270