EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-18864

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr3:89017270-89017730

Target genes

Number: 30
Name	Ensembl ID

Msto1	ENSMUSG00000068922
Dap3	ENSMUSG00000068921
Rusc1	ENSMUSG00000041263
Fdps	ENSMUSG00000059743
Pklr	ENSMUSG00000041237
Hcn3	ENSMUSG00000028051
Clk2	ENSMUSG00000068917
Scamp3	ENSMUSG00000028049
Fam189b	ENSMUSG00000032657
Gba	ENSMUSG00000028048
Mtx1	ENSMUSG00000064068
Muc1	ENSMUSG00000042784
Krtcap2	ENSMUSG00000042747
Trim46	ENSMUSG00000042766
Dpm3	ENSMUSG00000042737
Slc50a1	ENSMUSG00000027953
Efna1	ENSMUSG00000027954
Efna3	ENSMUSG00000028039
Efna4	ENSMUSG00000028040
Adam15	ENSMUSG00000028041
Dcst1	ENSMUSG00000042672
Gm15417	ENSMUSG00000074466
Zbtb7b	ENSMUSG00000028042
Lenep	ENSMUSG00000078173
Flad1	ENSMUSG00000042642
Cks1b	ENSMUSG00000028044
Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Pbxip1	ENSMUSG00000042613
Pmvk	ENSMUSG00000027952

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)

MA0730.1

chr3:89017484-89017501

GGGTTATCCCAAGGTCA

6.1

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01437

chr3:88963927-89055714

Th_Cells

Enhancer Sequence

TTCAATACAA GGGTCAAAAT CGTATTGCAA GGGAATGTTT TTTACTCTAA GAGGCATAAT 60
AAATGTTTTT TGCAATCCCG AAGACGTTGA ATGAAGAGAA GCAAGTCTGC CTAGTTCTAA 120
AGGTCTTCCT ACACAGTCTG GCTGTGGGGC TGTCTGGTCT ACGAAAACGA GATTCAATGG 180
ATTCATAGCG GAAAAAGAAG AGATCGTCCA GAAGGGGTTA TCCCAAGGTC ACCCAGCCAA 240
TAAATGGATA GGCAAGGTCT AAACCCATCT TCTGAAGCCC TGACCAAGCC TACTTCCACT 300
GCTACACAAA TCGATCCTAG GAAATCCGGA CGTAAGGCGC GGAGCCCACA TCGGCCTTCG 360
ACTGCCTCAG TTTCTCTCAA GACGCATGCG TCTCGGTTCT CGGCAAAGCT CGAGCACCCA 420
CTCCGGCTCT CCAGAGATCA GAGGACAGGT GCATGAGCCC 460