EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-17650

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr2:152597030-152598170

Target genes

Number: 18
Name	Ensembl ID

Zcchc3	ENSMUSG00000074682
Defb26	ENSMUSG00000074680
Defb29	ENSMUSG00000044249
Gm14161	ENSMUSG00000084935
Defb19	ENSMUSG00000050645
Defb25	ENSMUSG00000074678
Rem1	ENSMUSG00000000359
H13	ENSMUSG00000019188
Mcts2	ENSMUSG00000042814
Gm17559	ENSMUSG00000090656
Id1	ENSMUSG00000042745
Cox4i2	ENSMUSG00000009876
Bcl2l1	ENSMUSG00000007659
Tpx2	ENSMUSG00000027469
Foxs1	ENSMUSG00000074676
Dusp15	ENSMUSG00000042662
Pdrg1	ENSMUSG00000027472
BC020535	ENSMUSG00000027474

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr2:152598131-152598142	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr2:152598132-152598142	TCAAGGTCAT	+	6.02
Nr5a2	MA0505.1	chr2:152598128-152598143	AAGTTCAAGGTCATC	+	8.12

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01412	chr2:152592131-152657762	Th_Cells
mSE_07962	chr2:152597250-152598143	Kidney

Enhancer Sequence

GGAGAGATGG CTCAGCAGTT AAGAGCATTG GCTGCTTTTC TAGAAAAGCT GGGTTCAATT 60
CTAAGCACCT ATGTTGCAGC TCACAACCAT CTGTAACTCC GGTCCCAGGA GCTCTGATGC 120
CCGCTTCAGG CCTCTGCAGG TACCAGGGAC ACACATAGTG TACAGAGACA TTCAGGAAGT 180
ATACCCATAT ATACAAAATA GTAATAAAAA TAAAAGAATT GTGGCCTTTT TCTTGTTGGA 240
CTAACAGGTG GTGACTTAAC TCAGGAACTG TCCAGCCCCT CCGATGGATG GCTACAGTTA 300
GGAATCTGAG GTTCTGCTCT GAGCCTTGTG ATAAGGCGGA GGAACTAACT GTAGCCGCCT 360
AGATGCCAAG AAAGCCCAAG GTTACCAAGA GCAGGCTAGA AGACCTGCCC TCGCTCCAGT 420
GAGCACAGCA GCAGGTCAAG TTAACCTTGC ATTACAGTCT TGGGGAAAAC ATTTTCTTAA 480
ATGACCAATT GTGTCCACAT CAGAGCTGGG CAGAGTCCGA CTCTCTGGGC AGACAGCAAA 540
GGAGACCGAC ACAGTGGTTC AGCCTTTGTC TCCACCTCAT GTGTCCTCAG CTCTCTACAT 600
CAAGTGCACG GTTAGCCACA TGCGGTGGCA CACGCTTTTA ATTGCAACAC TCAGGATGCA 660
GAGTTTGAGG CCAGCCTGGA CTACACAGCA AGTTCTATGC CAGACAGAGC TACACAGTGA 720
GACCCTACGT CAAAACAAAA CAGAGTAACC CGCTCACCTC CTCAGCCAAG AAGCACAAAA 780
GAAGGAATAG GAGCCCAGAT GCAACCCAGA TGCAACTCAG GTGGTAGAGT TCCTTCCTGT 840
CCAGCATGCA TGAAGCTGTG GGTTAGGTCC AAAGGACTTT TTTTTTTTGG GGGGGTGTCT 900
TTTGAGACAG GGTTATCCTT TGTAACAGAG GCTATCCTGG ACTTACTTTA TGTACCAGGC 960
TGGCTTCAAA CTCATAGAGA TCCTCTTGAC TCTGCCTCCC AAGTTCTGGG ATTAAAGATG 1020
TGCATCACCA CACCCAGTGA TCTTAAATCT ACACTCTTTC AATCACAGCA CTTAGGGGGC 1080
TGAGGCAAGA GAAACCAGAA GTTCAAGGTC ATCTTTAGAA GTACAAAGGA AGTTGGAGGC 1140