EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-17420

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr2:130652010-130654130

Target genes

Number: 16
Name	Ensembl ID

Ptpra	ENSMUSG00000027303
Mrps26	ENSMUSG00000037740
Fastkd5	ENSMUSG00000079043
Ubox5	ENSMUSG00000027300
Prosapip1	ENSMUSG00000037703
Ddrgk1	ENSMUSG00000068290
Itpa	ENSMUSG00000074797
Slc4a11	ENSMUSG00000074796
Gm14057	ENSMUSG00000089662
A730017L22Rik	ENSMUSG00000085566
4930402H24Rik	ENSMUSG00000027309
Atrn	ENSMUSG00000027312
Hspa12b	ENSMUSG00000074793
1700037H04Rik	ENSMUSG00000027327
Cenpb	ENSMUSG00000068267
Mavs	ENSMUSG00000037523

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr2:130653937-130653952	GCCGGCCTTGAACTC	-	6.01
Nr5a2	MA0505.1	chr2:130653737-130653752	GCTGGCCTTGAACTC	-	8.25
SREBF1	MA0595.1	chr2:130652442-130652452	ATCACCCCAC	+	6.02
ZNF263	MA0528.1	chr2:130652464-130652485	CCCTCTTCCTCCTCCACCTCT	-	7.24
ZNF263	MA0528.1	chr2:130652461-130652482	ACCCCCTCTTCCTCCTCCACC	-	7.43
ZNF263	MA0528.1	chr2:130652458-130652479	CCCACCCCCTCTTCCTCCTCC	-	8.9

Enhancer Sequence

TTCCAGAGTG GTTTGTACTA GCTTGCAATC CCACCAACAA TGGAGGAGTG TTCCTCTTTT 60
TCTACATCCT CGCCAGCATC TGCTGTCACC TGAGTTTTTC ATCTTAGTCA TTCTGACTGG 120
CAGTGTTACG ATCTTGACAT GATACCAACA CAGAGCTGCA CTGCTTTCAA CCTTGTTTAG 180
AGAAGCTTCT ATCTGCAGTG GACAGTGGTT AATGTAGAGG CTCATGGCTA TTCAAAGTGC 240
TGACAACGCA AGTGACTGTG ACACTAAATG GGACACTCTT TGAACCACCA CCTCCTCCTC 300
TTCCATTACC CCATCCCTAC CTTCACTGCC TCCTTCACCT CCATCTCTAT CACCACCTCC 360
ACCACCACCC CTACCTTCAC CAACACCTCC TCCTCCACCT CTACCACCCC CACCTTTACT 420
ACCTCTTCTT CAATCACCCC ACCCCCAGCC CACCCCCTCT TCCTCCTCCA CCTCTACCCA 480
TACCTTCACC ACCACTCACT ACCACCTCAT CTTCCACCAC CACCACCACT ACACCTCCAC 540
CACCTGCTCC TCGACCACCA CCAGCACCAA GGCTTAGTGA CCATCAGGAG GAGAAGGAAG 600
ACAGAGTCTA AGAGCTGGAG GACAGAAAGA GTAAGTGCTT CTTCAGAAAG GCCGCAGCCA 660
CCGCACCAGC CAACTCAGTC AGTGTGGTTA CCTGCAGGAG ATCAAGCCAG TAGAAATCCC 720
AACACGGACA GTGAAAGTTC ATGAGTCCCC ATCCTAGCTG AAAAGCTACT GGCAGCTGAT 780
GGTTGCTAGG AGAAGAGTTT TGGGGTGTGG TCACCCACCA TAGTACAAAT ACCAATTCTC 840
CTCAAATTAA CATGCAGGCT TAACACAATC CCTATTAAAT GCCAAAACTT TATGGAAATA 900
GAAATGTTTA TTCTGAAATA TGTGGGGGCT GGTGGGATGA CAGGGTTCCA GGCTAGGAAG 960
GGCTATATTA GTTAGACTCT GTTCCAAGGA CACTAACTAA ATGTATGTGG CCAGCTCCAC 1020
AAGGGCTCAT CATACTATTC TTTTACTTTC TTTGTAGTTT CTATAATAAA AATTATGAGG 1080
AAGGGGCTTG TTATGGAATA ACAAGGTTTC AGAAGCAACA GCGTAAAGAT AACTTTAAAT 1140
ATTGAATAAA CGTCTTTCCC TGCCTGCCCC TGCACATTCT CTTTTTACCA GGATTGATCC 1200
TACAGTTGTT TCCCCTCTGG AAGGACTCTG CAAGTCGGAC CTTTGGCCCA TTTTCTGTGA 1260
GGACAGTATG CTGACTGCCT GCCAAGGCTA CCAAGAGCTC TTTGGTTTGC AAACTTATAA 1320
CCAGCCACTG ACAAAAAGCA TGACCAGATC ATGTGGTGAA GACACAAAAG AGTTTCCCTG 1380
GCAACTGTTG CTGGAAGCCA AGACAATACT GAAAATAGGA GACTTTTTTC CTACTTGTAC 1440
CCTGTCCAGT CCAAATACAG TGGGAACACA CAAATGTAAG AAAAGGGTCT TTTTCCTTAA 1500
GTAGAACATT ATCCTGATTA ATATTTTTTT ATCAAATGGT TTAAACTAAA TTTAGGGTTT 1560
TTTCCCTTCT TGTACATTTT CTTGATGCTC AAATTTAATC TTTAACCAGA ATATAGTCTG 1620
TCACTGAACC ATGAAGTATT ACAGTTACTT AATTATTTAC TTTGGGGGCT GAGTGAGACA 1680
GAGTTTCTCT ATATCCTGGC TCCCCTAGGA TTCACTCAAT AGACCAGGCT GGCCTTGAAC 1740
TCACAAAGAT CCATCTGCCT CTGCCTCCAG AGTGCTGAGA TTAAAGGTGT CTGCCATCAC 1800
ACCCAACTTT TTTATTTTAT TTTATTTTGC TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT 1860
TTTGGGTTTT TGAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCCTGGAA CTCACTTTGT 1920
AGACCAGGCC GGCCTTGAAC TCAAAATCCG CCTGCCTCTG CCTCCTGAGT GCTGGGATTA 1980
AAGGACTGCG CCACCATGCC TGGCTTAATT ATTTACTTTT AACAACAACA AAAAAAACCC 2040
CACATGAATA TACCTGATGA GTTCAAAGAA AAGCACCCTT TCCCATCCAG CACCCAGAAT 2100
TAATCACAGT TGACATCTGG 2120