EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-16079

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr2:30007530-30008760

Target genes

Number: 28
Name	Ensembl ID

Coq4	ENSMUSG00000026798
Trub2	ENSMUSG00000039826
Mir219	ENSMUSG00000065485
Cercam	ENSMUSG00000039787
Odf2	ENSMUSG00000026790
U6	ENSMUSG00000088348
Gle1	ENSMUSG00000019715
Spna2	ENSMUSG00000057738
Wdr34	ENSMUSG00000039715
Set	ENSMUSG00000054766
Pkn3	ENSMUSG00000026785
Zdhhc12	ENSMUSG00000015335
Zer1	ENSMUSG00000039686
Tbc1d13	ENSMUSG00000039678
Endog	ENSMUSG00000015337
D2Wsu81e	ENSMUSG00000039660
Ccbl1	ENSMUSG00000039648
Lrrc8a	ENSMUSG00000007476
Phyhd1	ENSMUSG00000079484
Dolk	ENSMUSG00000075419
Nup188	ENSMUSG00000052533
Sh3glb2	ENSMUSG00000026860
Fam73b	ENSMUSG00000026858
Dolpp1	ENSMUSG00000026856
Gm16323	ENSMUSG00000087435
Crat	ENSMUSG00000026853
Ppp2r4	ENSMUSG00000039515
Ier5l	ENSMUSG00000089762

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr2:30008614-30008625	GAGCCATAAAA	+	6.14
ELK4	MA0076.2	chr2:30007867-30007878	GCACTTCCGGC	+	6.14
Foxd3	MA0041.1	chr2:30008494-30008506	AAATGTTTGTTT	+	6.27
ZBTB7A	MA0750.2	chr2:30007866-30007879	CGCACTTCCGGCA	-	6.08

Enhancer Sequence

TGCGTGTCGG TGCTGTGCTG GCTGGACTTG AGACTTTGGA GGAGAGGAAA CAGTTGGAGC 60
AAGGACAGAG CCAGAGTCCC TTAGAGTGTT CTAAGACAGA CCAGGAGATG CTTGCCAAGA 120
CACTTGCAGT TCGGCTGCGG CCAGCCAGAG ACGGCCTTAG GAAGGAGGAG GTGCGCCTGG 180
GCACACATTA TTATTAATCT TCTTACATTA TATTTCTTTG TGTGCAGCCT GCGGGTGAGG 240
GAGTCTAGCT GGCATTGGTT CCCTCTTGCT ATCATGTGGG TCCCAGCAAA CTCAGGGCTG 300
CTGTGAGCAC CTTTACCCAC TGAGCCAGCC ATCTCACGCA CTTCCGGCAG CGCATTGTTC 360
CTTAGGTCAT TTAATACTAT GTTTTATTTA GTTTTGCTAT GTAGTTCAGG CTACTCTTGT 420
TCATCCTGTA GAGCCTCTGA GGCCAGGGTC TCTGCCTCCT GGGTGTTGGG GTTAAAGGTG 480
TGTACCAAGC ACACTGCTAA AAACACAAGT ATTTCCCTCT GCCAACTGTA AACTCTGAAA 540
ATGATAAATG CCACTTGCAA TACCTAGAAG AAATTAAAGT GTTTAGGGAT TTTGTGCCAG 600
TCATAGAGCC CAGGCCCACA CACACATCGA GCAAGCACTG TGTCACTGAG CCGGAACCAC 660
AGTCCCGAGA ATACTGAACA CGGTAAATAA AGGCTTGGGA GAAACTGGAG GAGGAGCAGA 720
GAACAAGACG GCTCTGCGTC CCCGGGTCAG AGACATCACA GGAGTGAATG TAGTCCCTAT 780
CCAAATGCCA CTGTGGCCAA AGGTGCTGGC ACATGCTCTA ATCCAGCGCT CCACAAGGAG 840
GAAGGATCCT GGTAAGCTGG ATACCAGCCA GCTCTGTGTA GTGAGTTCCA GTCTTCCTGG 900
GACTGCCTAT TGAGGCCTTT CCTGAAACAA AACTTCTATG ACATTGGGGT GTAGCTCAGT 960
GGCAAAATGT TTGTTTTGCC TGTCTGAGAC TGTGGGTCAG GTCCCTGACA CACGTACACA 1020
CACACACACA CAGGTATGCA CACACAACTC ACAGAAAAGG AGGGAAATCT GAAAATGGGT 1080
TAGGGAGCCA TAAAAGATCC CAGGTACCCA ATATAATCCT GAGCAAACAG GACAAAGCTG 1140
GGGGCCAGCT TTAAACTTCT AACTTACGGT AATTACAACA CGATGCTGGT GAGAGGGACC 1200
ACTTGCCATT GACCAACAGA ACAGGAAGCC 1230