EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM085-16065

Organism

Mus musculus

Tissue/cell

Kidney

Coordinate

chr2:29825290-29826350

Target genes

Number: 29
Name	Ensembl ID

Rapgef1	ENSMUSG00000039844
Gm13420	ENSMUSG00000079497
Coq4	ENSMUSG00000026798
Trub2	ENSMUSG00000039826
Slc27a4	ENSMUSG00000059316
Urm1	ENSMUSG00000069020
Mir219	ENSMUSG00000065485
Cercam	ENSMUSG00000039787
Odf2	ENSMUSG00000026790
U6	ENSMUSG00000088348
Gle1	ENSMUSG00000019715
Spna2	ENSMUSG00000057738
Wdr34	ENSMUSG00000039715
Set	ENSMUSG00000054766
Pkn3	ENSMUSG00000026785
Zdhhc12	ENSMUSG00000015335
Tbc1d13	ENSMUSG00000039678
Endog	ENSMUSG00000015337
D2Wsu81e	ENSMUSG00000039660
Ccbl1	ENSMUSG00000039648
Lrrc8a	ENSMUSG00000007476
Phyhd1	ENSMUSG00000079484
Dolk	ENSMUSG00000075419
Nup188	ENSMUSG00000052533
Sh3glb2	ENSMUSG00000026860
Fam73b	ENSMUSG00000026858
Dolpp1	ENSMUSG00000026856
Crat	ENSMUSG00000026853
Ppp2r4	ENSMUSG00000039515

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr2:29826247-29826260	AGCAGCTGTTTCT	+	6.28
NR2F1	MA0017.2	chr2:29826078-29826091	CATTTGACCTTTG	-	6.54

Enhancer Sequence

GGTTGAAAGG TAAGTACCAG CAAGATAGTA TGTGGGGAGC ATAAGAAGTA AGTTGCCCAG 60
CATTGCTCTG CATTTCTGGG GTTTGATGCA ATGCAGTATG GATCTCTTGC TTTCTTGATG 120
CTTAAGTCGT GCTCACCTCT GCAGAATTGC ACTAACAAGT GGAACTGAAT TAATCAACTT 180
GAAGGCTGAC GTGTAGAGCC AAGATCTTGA TGGAATGTAG TTGAAGCAAA AGGATTGACT 240
GTTTTCATTC ATGGTGCCAA AAGCCTTGTT TATATACTGT CTACTGCTCT GCTTGCTCTC 300
CTATCTGCTA CTAAAACCTG TATCTCAGCT GGTTGCCAGT TGGTTTGTTT GATCTGAGAA 360
TCAGCTAGTA CACAGCTTTG TAGGTGCTAA CCAGTTCTTT GATAGTGTGT TCCCAGGCAA 420
GCCATTTTAA ATCTGTGGAT GTTAGTCCTC TTGCTTTGCA AATCTGAGAT TCAAAAAACG 480
CTGGCCTCAT AAGCCACAGA GAAAAGGTAT TGTCCGTTCT GCACATTTGG GCCCTGACTA 540
AGCAACAAAA CCCAAACTGA TTGTGAGCTT TTGCCTTGGG TGATTACAAC GAAATTTTTC 600
CATGGAGCAA ACCGATGCCA AGCCCTCCTT CCTCCACGAT ATTCGGCATG TTTCAGTGGT 660
TTTAAACACA AGCAAAAGCA AAGACTTGCA TCGTCACATG ACTTTTTCTT TCTTGAAGTG 720
CCTAGGAAAT GTGTGTGAGG CTGTCCTAAA CCACTCACTT ACAGGTGCCA GATTTGTGGA 780
GTCCAAAGCA TTTGACCTTT GGTTAGAAAA TGTTTTTATC CATAGTCTGT TTCTTAGCAC 840
AGTGTGATTC CTAACCGCTG TGTCTCCATG TTCCTACTGT AGATACATAG TGGCATGTAA 900
CTGCTTCTAG ATTAGTGAAG GCACCTTACA GTTCGCCAAG TACCAAGAAG GGCCTCAAGC 960
AGCTGTTTCT TGGCATTTGG CTGGCCTGGC AAACAAAGAT ACTCATTTAA GTCTCTGTTT 1020
AGAGAATCTA GCTCAGTTGA TAATGTGTAC AAATAAATTT 1060